RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 C4orf19Q8IY42 314 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 BANK1Q8NDB2 785 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 TIFAQ96CG3 184 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 EIF2AK1Q9BQI3 630 aaKnown RBP16.95■□□□□ 0.3
SNX13-207ENST00000475800 LXNQ9BS40 222 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 ZNF576Q9H609 170 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 ZSWIM4Q9H7M6 989 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 PPME1Q9Y570 386 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 LOXHD1Q8IVV2 1947 aa16.95■□□□□ 0.3
SNX13-207ENST00000475800 POTEMA6NI47 508 aa16.94■□□□□ 0.3
SNX13-207ENST00000475800 MAGEB2O15479 319 aa16.94■□□□□ 0.3
SNX13-207ENST00000475800 ZSCAN22P10073 491 aaPredicted RBP16.94■□□□□ 0.3
SNX13-207ENST00000475800 MUTP22033 750 aa16.94■□□□□ 0.3
SNX13-207ENST00000475800 RFC2P35250 354 aa16.94■□□□□ 0.3
SNX13-207ENST00000475800 IGBP1P78318 339 aa16.94■□□□□ 0.3
SNX13-207ENST00000475800 RPAINQ86UA6 219 aa16.94■□□□□ 0.3
SNX13-207ENST00000475800 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
SNX13-207ENST00000475800 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
SNX13-207ENST00000475800 NIFKQ9BYG3 293 aaKnown RBP16.94■□□□□ 0.3
SNX13-207ENST00000475800 TUFT1Q9NNX1 390 aa16.94■□□□□ 0.3
SNX13-207ENST00000475800 PCDHA2Q9Y5H9 948 aa16.94■□□□□ 0.3
SNX13-207ENST00000475800 LYPLA2O95372 231 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 CKBP12277 381 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 SELPP16109 830 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 TRIM71Q2Q1W2 868 aaKnown RBP16.93■□□□□ 0.3
SNX13-207ENST00000475800 MARCH8Q5T0T0 291 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 MTHFD1LQ6UB35 978 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 OTUD6AQ7L8S5 288 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 OTOP2Q7RTS6 562 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 EXOC8Q8IYI6 725 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 IGSF22Q8N9C0 903 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 ZNF396Q96N95 335 aaPredicted RBP16.93■□□□□ 0.3
SNX13-207ENST00000475800 POLR3CQ9BUI4 534 aaPredicted RBP16.93■□□□□ 0.3
SNX13-207ENST00000475800 PBX4Q9BYU1 374 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 LRWD1Q9UFC0 647 aa16.93■□□□□ 0.3
SNX13-207ENST00000475800 SEPT9Q9UHD8 586 aaPredicted RBP16.93■□□□□ 0.3
SNX13-207ENST00000475800 VCANP13611 3396 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 SCN5AQ14524 2016 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 SMIM35A0A1B0GVV1 85 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 DDX11L8A8MPP1 907 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 ZBTB42B2RXF5 422 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 SLITRK3O94933 977 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 F13A1P00488 732 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 PFKMP08237 780 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 KLRC1P26715 233 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 RPA1P27694 616 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
SNX13-207ENST00000475800 THPOP40225 353 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 CYP4A11Q02928 519 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 SF3A1Q15459 793 aaKnown RBP16.92■□□□□ 0.3
SNX13-207ENST00000475800 LRRC8DQ7L1W4 858 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 TRMT1LQ7Z2T5 733 aaKnown RBP16.92■□□□□ 0.3
SNX13-207ENST00000475800 TPH2Q8IWU9 490 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 RPUSD2Q8IZ73 545 aaKnown RBP16.92■□□□□ 0.3
SNX13-207ENST00000475800 ZNF710Q8N1W2 664 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 NME8Q8N427 588 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 USP38Q8NB14 1042 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 SCLYQ96I15 445 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 JPH2Q9BR39 696 aaPredicted RBP16.92■□□□□ 0.3
SNX13-207ENST00000475800 WNT8AQ9H1J5 351 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 RGL1Q9NZL6 768 aa16.92■□□□□ 0.3
SNX13-207ENST00000475800 CXXC1Q9P0U4 656 aaPredicted RBP16.92■□□□□ 0.3
SNX13-207ENST00000475800 MORC2Q9Y6X9 1032 aaPredicted RBP16.92■□□□□ 0.3
SNX13-207ENST00000475800 ARID2Q68CP9 1835 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 STBD1O95210 358 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 C22orf31O95567 290 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 IQCF3P0C7M6 154 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 XRCC6P12956 609 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNX13-207ENST00000475800 TMOD1P28289 359 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
SNX13-207ENST00000475800 TBC1D8BQ0IIM8 1120 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 CTTNQ14247 550 aaKnown RBP16.91■□□□□ 0.3
SNX13-207ENST00000475800 TARBP2Q15633 366 aaKnown RBP16.91■□□□□ 0.3
SNX13-207ENST00000475800 ATL3Q6DD88 541 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 PSRC1Q6PGN9 363 aaPredicted RBP16.91■□□□□ 0.3
SNX13-207ENST00000475800 TRAPPC12Q8WVT3 735 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 AK8Q96MA6 479 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 PRDM12Q9H4Q4 367 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 IL23AQ9NPF7 189 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 DAXXQ9UER7 740 aaPredicted RBP16.91■□□□□ 0.3
SNX13-207ENST00000475800 TET1Q8NFU7 2136 aa16.91■□□□□ 0.3
SNX13-207ENST00000475800 RSPH10B2B2RC85 870 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 M0QZ92 97 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 SLC26A4O43511 780 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 FGBP02675 491 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 RSPH10BP0C881 870 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 FAM26DQ5JW98 314 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 ZNF618Q5T7W0 954 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 IER5Q5VY09 327 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 KRT79Q5XKE5 535 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 ANO5Q75V66 913 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 KCTD17Q8N5Z5 321 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 WNT8BQ93098 351 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 CCDC43Q96MW1 224 aaKnown RBP16.9■□□□□ 0.3
SNX13-207ENST00000475800 NKX2-4Q9H2Z4 354 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 PRDM6Q9NQX0 595 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 CYP26B1Q9NR63 512 aa16.9■□□□□ 0.3
SNX13-207ENST00000475800 ANKEF1Q9NU02 776 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms