RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 PGBD1Q96JS3 809 aa16.79■□□□□ 0.28
TRIM11-203ENST00000475775 TCEANC2Q96MN5 208 aa16.79■□□□□ 0.28
TRIM11-203ENST00000475775 PCYT2Q99447 389 aa16.79■□□□□ 0.28
TRIM11-203ENST00000475775 PLVAPQ9BX97 442 aa16.79■□□□□ 0.28
TRIM11-203ENST00000475775 RC3H2Q9HBD1 1191 aaKnown RBP16.79■□□□□ 0.28
TRIM11-203ENST00000475775 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
TRIM11-203ENST00000475775 BRPF3Q9ULD4 1205 aa16.79■□□□□ 0.28
TRIM11-203ENST00000475775 COL1A2P08123 1366 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 DOCK5Q9H7D0 1870 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 IGSF9BQ9UPX0 1349 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 MEIS1O00470 390 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 BACH1O14867 736 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 DGKIO75912 1065 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 REC8O95072 547 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 ATG7O95352 703 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 ARP10275 920 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 CD52P31358 61 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 BMPR1AP36894 532 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 FUT2Q10981 343 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 ITGB3BPQ13352 177 aaPredicted RBP16.78■□□□□ 0.28
TRIM11-203ENST00000475775 SMAD4Q13485 552 aaKnown RBP16.78■□□□□ 0.28
TRIM11-203ENST00000475775 PFKFB3Q16875 520 aaPredicted RBP16.78■□□□□ 0.28
TRIM11-203ENST00000475775 MIS18BP1Q6P0N0 1132 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 NPAS4Q8IUM7 802 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 CMTR2Q8IYT2 770 aaKnown RBP16.78■□□□□ 0.28
TRIM11-203ENST00000475775 FBXL6Q8N531 539 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 CYP2W1Q8TAV3 490 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 PPP2R3CQ969Q6 453 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 ZNF689Q96CS4 500 aaPredicted RBP16.78■□□□□ 0.28
TRIM11-203ENST00000475775 IGFLR1Q9H665 355 aa16.78■□□□□ 0.28
TRIM11-203ENST00000475775 KDM3AQ9Y4C1 1321 aa16.77■□□□□ 0.28
TRIM11-203ENST00000475775 ESYT2A0FGR8 921 aa16.77■□□□□ 0.28
TRIM11-203ENST00000475775 HBP1O60381 514 aa16.77■□□□□ 0.28
TRIM11-203ENST00000475775 TBX10O75333 385 aa16.77■□□□□ 0.28
TRIM11-203ENST00000475775 GTF2F1P35269 517 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRIM11-203ENST00000475775 KRT76Q01546 638 aa16.77■□□□□ 0.28
TRIM11-203ENST00000475775 NAALADL2Q58DX5 795 aa16.77■□□□□ 0.28
TRIM11-203ENST00000475775 CELF4Q9BZC1 486 aaKnown RBP16.77■□□□□ 0.28
TRIM11-203ENST00000475775 AGO3Q9H9G7 860 aaKnown RBP16.77■□□□□ 0.28
TRIM11-203ENST00000475775 C6orf50Q9HD87 102 aa16.77■□□□□ 0.28
TRIM11-203ENST00000475775 CD207Q9UJ71 328 aa16.77■□□□□ 0.28
TRIM11-203ENST00000475775 SNX14Q9Y5W7 946 aa16.77■□□□□ 0.28
TRIM11-203ENST00000475775 KIAA1671Q9BY89 1806 aa16.77■□□□□ 0.27
TRIM11-203ENST00000475775 TTC3P53804 2025 aa16.77■□□□□ 0.27
TRIM11-203ENST00000475775 WDR87Q6ZQQ6 2873 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 IGKV6D-21A0A0A0MT36 114 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 GRM6O15303 877 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 LINC01565O15544 149 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 MMP1P03956 469 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 SCG2P13521 617 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 GNA11P29992 359 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 CDC27P30260 824 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 ZXDAP98168 799 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 AKAP17AQ02040 695 aaKnown RBP16.76■□□□□ 0.27
TRIM11-203ENST00000475775 TMEM62Q0P6H9 643 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 MTHFD1LQ6UB35 978 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 PLA2G4DQ86XP0 818 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 SMAP1Q8IYB5 467 aaPredicted RBP16.76■□□□□ 0.27
TRIM11-203ENST00000475775 REXO1Q8N1G1 1221 aaKnown RBP16.76■□□□□ 0.27
TRIM11-203ENST00000475775 ATP8B4Q8TF62 1192 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 P2RX5Q93086 422 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 ALG13Q9NP73 1137 aaKnown RBP16.76■□□□□ 0.27
TRIM11-203ENST00000475775 ZNF302Q9NR11 478 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 TBC1D22BQ9NU19 505 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 TMEM260Q9NX78 707 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 LRFN2Q9ULH4 789 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 PADI3Q9ULW8 664 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 LOXHD1Q8IVV2 1947 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 NID2Q14112 1375 aa16.76■□□□□ 0.27
TRIM11-203ENST00000475775 DDX39AO00148 427 aaKnown RBP16.75■□□□□ 0.27
TRIM11-203ENST00000475775 IPO5O00410 1097 aaKnown RBP16.75■□□□□ 0.27
TRIM11-203ENST00000475775 EPB41L2O43491 1005 aaKnown RBP16.75■□□□□ 0.27
TRIM11-203ENST00000475775 CYP3A4P08684 503 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 ZNF484Q5JVG2 852 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 PDXDC2PQ6P474 469 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 BLOC1S2Q6QNY1 142 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 ABHD15Q6UXT9 468 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 CCDC148Q8NFR7 591 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 BICD2Q8TD16 824 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 TRAPPC12Q8WVT3 735 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 ATOH1Q92858 354 aaPredicted RBP16.75■□□□□ 0.27
TRIM11-203ENST00000475775 ZNF577Q9BSK1 485 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 ZMYND12Q9H0C1 365 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 CEP131Q9UPN4 1083 aa16.75■□□□□ 0.27
TRIM11-203ENST00000475775 FAM86B1E9PN63 330 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 CSPG5O95196 566 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 FAM86B2P0C5J1 330 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 LINC00271P0C7V0 271 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 CPA1P15085 419 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 KLRC1P26715 233 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 ADAM15Q13444 863 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 JAKMIP3Q5VZ66 844 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 ZNF746Q6NUN9 644 aaPredicted RBP16.74■□□□□ 0.27
TRIM11-203ENST00000475775 CCDC60Q8IWA6 550 aaPredicted RBP16.74■□□□□ 0.27
TRIM11-203ENST00000475775 CKAP2LQ8IYA6 745 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 LINC01599Q8WXQ3 324 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 ZBTB10Q96DT7 871 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 JAKMIP1Q96N16 626 aaKnown RBP16.74■□□□□ 0.27
TRIM11-203ENST00000475775 IRF2BPLQ9H1B7 796 aa16.74■□□□□ 0.27
TRIM11-203ENST00000475775 C1orf112Q9NSG2 853 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms