RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MRPL42Q9Y6G3 142 aaKnown RBP7.98□□□□□ -1.13
HDAC3-207ENST00000475549 COL4A6Q14031 1691 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 ADGRA3Q8IWK6 1321 aa7.98□□□□□ -1.13
HDAC3-207ENST00000475549 MYH7BA7E2Y1 1941 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 ZNF862O60290 1169 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 DTNBO60941 627 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 ITGB1P05556 798 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 RB1P06400 928 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 CTNNB1P35222 781 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 FAM189BP81408 668 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 HYAL1Q12794 435 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 BTG3Q14201 252 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-207ENST00000475549 PTPROQ16827 1216 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 KIZQ2M2Z5 673 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 ZNF484Q5JVG2 852 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 FAM102BQ5T8I3 360 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 PTCRAQ6ISU1 281 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-207ENST00000475549 ZNF746Q6NUN9 644 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-207ENST00000475549 MIS18BP1Q6P0N0 1132 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 RUFY3Q7L099 469 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 NPAS4Q8IUM7 802 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 LINC01465Q8N7H1 131 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 SPPL3Q8TCT6 385 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 BBXQ8WY36 941 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-207ENST00000475549 TNPO1Q92973 898 aaKnown RBP7.97□□□□□ -1.13
HDAC3-207ENST00000475549 PABPC5Q96DU9 382 aaKnown RBP7.97□□□□□ -1.13
HDAC3-207ENST00000475549 AIFM3Q96NN9 605 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 PPP1R16BQ96T49 567 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 SLC26A6Q9BXS9 759 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 FTHL17Q9BXU8 183 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 RNF26Q9BY78 433 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-207ENST00000475549 ADAMTS10Q9H324 1103 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 NSUN3Q9H649 340 aaKnown RBP7.97□□□□□ -1.13
HDAC3-207ENST00000475549 TBC1D22BQ9NU19 505 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 HCSTQ9UBK5 93 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 GINS2Q9Y248 185 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 PCDHGC5Q9Y5F6 944 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 PCDHA10Q9Y5I2 948 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 MYH6P13533 1939 aa7.97□□□□□ -1.13
HDAC3-207ENST00000475549 NCOR1O75376 2440 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 C9IYK1 514 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 PI4K2BG5E9Z4 385 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 LINC01565O15544 149 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 CSPG5O95196 566 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 STBD1O95210 358 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 VTNP04004 478 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 RPLP2P05387 115 aaKnown RBP7.96□□□□□ -1.14
HDAC3-207ENST00000475549 PSMA5P28066 241 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 GNA11P29992 359 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 IRS1P35568 1242 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 USP11P51784 963 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 NFX1Q12986 1120 aaKnown RBP7.96□□□□□ -1.14
HDAC3-207ENST00000475549 PAK2Q13177 524 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 DSC3Q14574 896 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 UGCGQ16739 394 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 TIGD5Q53EQ6 642 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 FAM160B1Q5W0V3 765 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 B3GNT9Q6UX72 402 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 FAM228AQ86W67 206 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 CMTR2Q8IYT2 770 aaKnown RBP7.96□□□□□ -1.14
HDAC3-207ENST00000475549 GJD3Q8N144 294 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 KLHL23Q8NBE8 558 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 SLC5A5Q92911 643 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 CEP89Q96ST8 783 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 OSMRQ99650 979 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 ADAM2Q99965 735 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 LRFN3Q9BTN0 628 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 C11orf84Q9BUA3 381 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-207ENST00000475549 PLVAPQ9BX97 442 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 C1QTNF1Q9BXJ1 281 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 UPF3BQ9BZI7 483 aaKnown RBP7.96□□□□□ -1.14
HDAC3-207ENST00000475549 SH3GLB2Q9NR46 395 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 RGS18Q9NS28 235 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 GABBR1Q9UBS5 961 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 ST3GAL5Q9UNP4 418 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 C5orf42Q9H799 3197 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 DOCK5Q9H7D0 1870 aa7.96□□□□□ -1.14
HDAC3-207ENST00000475549 CYP3A7-CYP3A51PA0A087WV96 503 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 TMEM150BA6NC51 233 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 M0QZ92 97 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 RPS6KA5O75582 802 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 PSMD10O75832 226 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 REC8O95072 547 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 TDP2O95551 362 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 MMP1P03956 469 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 PSAPP07602 524 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 CYP3A7P24462 503 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 SARSP49591 514 aaKnown RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 CLCN3P51790 818 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 CRYBB1P53674 252 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 SETQ01105 290 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 ADAM15Q13444 863 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 DRP2Q13474 957 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 TARBP2Q15633 366 aaKnown RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 Q4G0T1 1027 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 PAN2Q504Q3 1202 aaKnown RBP7.95□□□□□ -1.14
HDAC3-207ENST00000475549 MCTP2Q6DN12 878 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 EFCAB12Q6NXP0 572 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 LRRC55Q6ZSA7 311 aa7.95□□□□□ -1.14
HDAC3-207ENST00000475549 EP400NLQ6ZTU2 488 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms