RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ASMTLO95671 621 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 RAC3P60763 192 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 MOGSQ13724 837 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 ZNF460Q14592 562 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 FNDC3BQ53EP0 1204 aaKnown RBP6.85□□□□□ -1.31
LTN1-204ENST00000475344 ZCCHC8Q6NZY4 707 aaKnown RBP6.85□□□□□ -1.31
LTN1-204ENST00000475344 FILIP1Q7Z7B0 1213 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 TAX1BP1Q86VP1 789 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 DLG3Q92796 817 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 NEIL1Q96FI4 390 aaPredicted RBP6.85□□□□□ -1.31
LTN1-204ENST00000475344 KLC2Q9H0B6 622 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 C12orf65Q9H3J6 166 aaKnown RBP6.85□□□□□ -1.31
LTN1-204ENST00000475344 FBXO10Q9UK96 956 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 NR2E1Q9Y466 385 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 ASB1Q9Y576 335 aa6.85□□□□□ -1.31
LTN1-204ENST00000475344 ZNF623O75123 536 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 DNAJC8O75937 253 aaPredicted RBP6.84□□□□□ -1.31
LTN1-204ENST00000475344 ZBTB48P10074 688 aaPredicted RBP6.84□□□□□ -1.31
LTN1-204ENST00000475344 KIF11P52732 1056 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 STILQ15468 1287 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 CATSPEREQ5SY80 951 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 PIK3R6Q5UE93 754 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 LARP4Q71RC2 724 aaKnown RBP eCLIP6.84□□□□□ -1.31
LTN1-204ENST00000475344 CXXC5Q7LFL8 322 aaKnown RBP6.84□□□□□ -1.31
LTN1-204ENST00000475344 RTKN2Q8IZC4 609 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 SH3RF3Q8TEJ3 882 aaPredicted RBP6.84□□□□□ -1.31
LTN1-204ENST00000475344 SCYL1Q96KG9 808 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 DPYSL5Q9BPU6 564 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 C1QTNF3Q9BXJ4 246 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 PCIF1Q9H4Z3 704 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 CD248Q9HCU0 757 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 CABP5Q9NP86 173 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 FAM184BQ9ULE4 1060 aa6.84□□□□□ -1.31
LTN1-204ENST00000475344 A0A0G2JNJ9 132 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 PTPDC1A2A3K4 754 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 PATE3B3GLJ2 98 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 CDC14BO60729 498 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 ASLP04424 464 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 SDHAP31040 664 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 RANGAP1P46060 587 aaPredicted RBP6.83□□□□□ -1.32
LTN1-204ENST00000475344 MEOX1P50221 254 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 STAT5BP51692 787 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 GRAMD4Q6IC98 578 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 TCTN3Q6NUS6 607 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 CHST14Q8NCH0 376 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 DNERQ8NFT8 737 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 Q8TCH9 128 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 CALML6Q8TD86 181 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 PIF1Q9H611 641 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 Q9UFV3 132 aa6.83□□□□□ -1.32
LTN1-204ENST00000475344 ZFR2Q9UPR6 939 aaKnown RBP6.83□□□□□ -1.32
LTN1-204ENST00000475344 GOLGA6L22H0YM25 854 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 FOXS1O43638 330 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 JMJD7P0C870 316 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 SDSP20132 328 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 FLT3P36888 993 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 PCOLCEQ15113 449 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 ARHGAP44Q17R89 818 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 C21orf62-AS1Q17RA5 79 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 KANK2Q63ZY3 851 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 UBE2R2Q712K3 238 aaPredicted RBP6.82□□□□□ -1.32
LTN1-204ENST00000475344 SPRED1Q7Z699 444 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 NPM2Q86SE8 214 aaKnown RBP6.82□□□□□ -1.32
LTN1-204ENST00000475344 OR14A2Q96R54 314 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 CDK5RAP1Q96SZ6 601 aaKnown RBP6.82□□□□□ -1.32
LTN1-204ENST00000475344 MAGEL2Q9UJ55 1249 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 OAZ3Q9UMX2 235 aa6.82□□□□□ -1.32
LTN1-204ENST00000475344 MUSKO15146 869 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 ARHGAP6O43182 974 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 CR2P20023 1033 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 APEX1P27695 318 aaKnown RBP6.81□□□□□ -1.32
LTN1-204ENST00000475344 SELENOPP49908 381 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 MRE11P49959 708 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 MECP2P51608 486 aaKnown RBP6.81□□□□□ -1.32
LTN1-204ENST00000475344 PABPC4Q13310 644 aaKnown RBP eCLIP6.81□□□□□ -1.32
LTN1-204ENST00000475344 EIF4HQ15056 248 aaKnown RBP6.81□□□□□ -1.32
LTN1-204ENST00000475344 TBR1Q16650 682 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 AGBL4Q5VU57 503 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 CC2D1AQ6P1N0 951 aaPredicted RBP6.81□□□□□ -1.32
LTN1-204ENST00000475344 USP30Q70CQ3 517 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 OTOP1Q7RTM1 612 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 OR14K1Q8NGZ2 314 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 WWC2-AS2Q96NR7 200 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 TMEM260Q9NX78 707 aa6.81□□□□□ -1.32
LTN1-204ENST00000475344 H7C1D1 291 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 MATN3O15232 486 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 SLC6A3Q01959 620 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 ALDH6A1Q02252 535 aaKnown RBP6.8□□□□□ -1.32
LTN1-204ENST00000475344 ZNF174Q15697 407 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 CFAP100Q494V2 611 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 HS1BP3Q53T59 392 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 TMEM200BQ69YZ2 307 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 FUKQ8N0W3 1084 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 ADOQ96SZ5 270 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 PUF60Q9UHX1 559 aaKnown RBP6.8□□□□□ -1.32
LTN1-204ENST00000475344 TSC22D4Q9Y3Q8 395 aa6.8□□□□□ -1.32
LTN1-204ENST00000475344 TRAF5O00463 557 aa6.79□□□□□ -1.32
LTN1-204ENST00000475344 DVL2O14641 736 aa6.79□□□□□ -1.32
LTN1-204ENST00000475344 TNFRSF1AP19438 455 aa6.79□□□□□ -1.32
LTN1-204ENST00000475344 RGS3P49796 1198 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms