RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 PLA2G4DQ86XP0 818 aa28.34■■■□□ 2.13
TMEM54-205ENST00000475208 POF1BQ8WVV4 589 aa28.34■■■□□ 2.13
TMEM54-205ENST00000475208 FAM217BQ9NTX9 383 aaPredicted RBP28.34■■■□□ 2.13
TMEM54-205ENST00000475208 COL1A2P08123 1366 aa28.34■■■□□ 2.13
TMEM54-205ENST00000475208 FAM86B1E9PN63 330 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 MGEA5O60502 916 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 FAM86B2P0C5J1 330 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 CDC27P30260 824 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 BMP2KLQ5H9B9 411 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 JAKMIP3Q5VZ66 844 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 PDXDC2PQ6P474 469 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 RASEFQ8IZ41 740 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 CDHR5Q9HBB8 845 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 ZNF302Q9NR11 478 aa28.33■■■□□ 2.13
TMEM54-205ENST00000475208 NOC2LQ9Y3T9 749 aaKnown RBP28.33■■■□□ 2.13
TMEM54-205ENST00000475208 RPS6KA5O75582 802 aa28.32■■■□□ 2.12
TMEM54-205ENST00000475208 KIAA0319LQ8IZA0 1049 aa28.32■■■□□ 2.12
TMEM54-205ENST00000475208 TMEM40Q8WWA1 233 aa28.32■■■□□ 2.12
TMEM54-205ENST00000475208 MSLNLQ96KJ4 702 aa28.32■■■□□ 2.12
TMEM54-205ENST00000475208 PCDHB7Q9Y5E2 793 aa28.32■■■□□ 2.12
TMEM54-205ENST00000475208 TSGA10IPQ3SY00 556 aa28.31■■■□□ 2.12
TMEM54-205ENST00000475208 ZNF484Q5JVG2 852 aa28.31■■■□□ 2.12
TMEM54-205ENST00000475208 MIS18BP1Q6P0N0 1132 aa28.31■■■□□ 2.12
TMEM54-205ENST00000475208 SKAP1Q86WV1 359 aa28.31■■■□□ 2.12
TMEM54-205ENST00000475208 EFHBQ8N7U6 833 aa28.31■■■□□ 2.12
TMEM54-205ENST00000475208 NAP1L2Q9ULW6 460 aaPredicted RBP28.31■■■□□ 2.12
TMEM54-205ENST00000475208 IGLV3-22A0A075B6J6 115 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 DENND3A2RUS2 1198 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 ZBTB42B2RXF5 422 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 IPO5O00410 1097 aaKnown RBP28.3■■■□□ 2.12
TMEM54-205ENST00000475208 DHX15O43143 795 aaKnown RBP28.3■■■□□ 2.12
TMEM54-205ENST00000475208 NRIP1P48552 1158 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 PFKFB3Q16875 520 aaPredicted RBP28.3■■■□□ 2.12
TMEM54-205ENST00000475208 SWSAP1Q6NVH7 229 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 CRYGNQ8WXF5 182 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 PPP1R16BQ96T49 567 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 ADAM2Q99965 735 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 C1orf112Q9NSG2 853 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 CLEC1BQ9P126 229 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 MUTYHQ9UIF7 546 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 PCDHGC5Q9Y5F6 944 aa28.3■■■□□ 2.12
TMEM54-205ENST00000475208 PPFIA3O75145 1194 aa28.29■■■□□ 2.12
TMEM54-205ENST00000475208 CYP3A4P08684 503 aa28.29■■■□□ 2.12
TMEM54-205ENST00000475208 ATP4AP20648 1035 aa28.29■■■□□ 2.12
TMEM54-205ENST00000475208 RCAN1P53805 252 aa28.29■■■□□ 2.12
TMEM54-205ENST00000475208 KRT32Q14532 448 aa28.29■■■□□ 2.12
TMEM54-205ENST00000475208 ODR4Q5SWX8 454 aa28.29■■■□□ 2.12
TMEM54-205ENST00000475208 SPOUT1Q5T280 376 aaKnown RBP28.29■■■□□ 2.12
TMEM54-205ENST00000475208 FAM43BQ6ZT52 329 aaPredicted RBP28.29■■■□□ 2.12
TMEM54-205ENST00000475208 RGS18Q9NS28 235 aa28.29■■■□□ 2.12
TMEM54-205ENST00000475208 ST3GAL5Q9UNP4 418 aa28.29■■■□□ 2.12
TMEM54-205ENST00000475208 PLXNA4Q9HCM2 1894 aa28.29■■■□□ 2.12
TMEM54-205ENST00000475208 TBKBP1A7MCY6 615 aa28.28■■■□□ 2.12
TMEM54-205ENST00000475208 EYA4O95677 639 aa28.28■■■□□ 2.12
TMEM54-205ENST00000475208 HERC4Q5GLZ8 1057 aaPredicted RBP28.28■■■□□ 2.12
TMEM54-205ENST00000475208 RBM23Q86U06 439 aaKnown RBP28.28■■■□□ 2.12
TMEM54-205ENST00000475208 RNF135Q8IUD6 432 aa28.28■■■□□ 2.12
TMEM54-205ENST00000475208 CKAP2LQ8IYA6 745 aa28.28■■■□□ 2.12
TMEM54-205ENST00000475208 OSMRQ99650 979 aa28.28■■■□□ 2.12
TMEM54-205ENST00000475208 ZNF577Q9BSK1 485 aa28.28■■■□□ 2.12
TMEM54-205ENST00000475208 RNF216Q9NWF9 866 aaPredicted RBP28.28■■■□□ 2.12
TMEM54-205ENST00000475208 PCDHB12Q9Y5F1 795 aa28.28■■■□□ 2.12
TMEM54-205ENST00000475208 C9IYK1 514 aa28.27■■■□□ 2.12
TMEM54-205ENST00000475208 ADAMTS3O15072 1205 aa28.27■■■□□ 2.12
TMEM54-205ENST00000475208 GPR182O15218 404 aa28.27■■■□□ 2.12
TMEM54-205ENST00000475208 C22orf31O95567 290 aa28.27■■■□□ 2.12
TMEM54-205ENST00000475208 GLP2RO95838 553 aa28.27■■■□□ 2.12
TMEM54-205ENST00000475208 ADD1P35611 737 aaKnown RBP28.27■■■□□ 2.12
TMEM54-205ENST00000475208 METAP2P50579 478 aaKnown RBP eCLIP28.27■■■□□ 2.12
TMEM54-205ENST00000475208 KIZQ2M2Z5 673 aa28.27■■■□□ 2.12
TMEM54-205ENST00000475208 SLC24A5Q71RS6 500 aa28.27■■■□□ 2.12
TMEM54-205ENST00000475208 SMRP1Q8NCR6 262 aa28.27■■■□□ 2.12
TMEM54-205ENST00000475208 AAASQ9NRG9 546 aa28.27■■■□□ 2.12
TMEM54-205ENST00000475208 BARX2Q9UMQ3 279 aaPredicted RBP28.27■■■□□ 2.12
TMEM54-205ENST00000475208 FNDC1Q4ZHG4 1894 aaPredicted RBP28.27■■■□□ 2.12
TMEM54-205ENST00000475208 ESYT2A0FGR8 921 aa28.26■■■□□ 2.11
TMEM54-205ENST00000475208 CRYBB1P53674 252 aaPredicted RBP28.26■■■□□ 2.11
TMEM54-205ENST00000475208 FGD1P98174 961 aa28.26■■■□□ 2.11
TMEM54-205ENST00000475208 SETQ01105 290 aaPredicted RBP28.26■■■□□ 2.11
TMEM54-205ENST00000475208 COASYQ13057 564 aa28.26■■■□□ 2.11
TMEM54-205ENST00000475208 FAM102BQ5T8I3 360 aa28.26■■■□□ 2.11
TMEM54-205ENST00000475208 ZNF746Q6NUN9 644 aaPredicted RBP28.26■■■□□ 2.11
TMEM54-205ENST00000475208 HFE2Q6ZVN8 426 aa28.26■■■□□ 2.11
TMEM54-205ENST00000475208 FAM228AQ86W67 206 aa28.26■■■□□ 2.11
TMEM54-205ENST00000475208 BBXQ8WY36 941 aaPredicted RBP28.26■■■□□ 2.11
TMEM54-205ENST00000475208 TBC1D22BQ9NU19 505 aa28.26■■■□□ 2.11
TMEM54-205ENST00000475208 HCSTQ9UBK5 93 aa28.26■■■□□ 2.11
TMEM54-205ENST00000475208 EVPLQ92817 2033 aa28.26■■■□□ 2.11
TMEM54-205ENST00000475208 HMGB1P09429 215 aaKnown RBP28.25■■■□□ 2.11
TMEM54-205ENST00000475208 UBE3AQ05086 875 aa28.25■■■□□ 2.11
TMEM54-205ENST00000475208 TRMT1LQ7Z2T5 733 aaKnown RBP28.25■■■□□ 2.11
TMEM54-205ENST00000475208 REXO1Q8N1G1 1221 aaKnown RBP28.25■■■□□ 2.11
TMEM54-205ENST00000475208 MICAL1Q8TDZ2 1067 aa28.25■■■□□ 2.11
TMEM54-205ENST00000475208 ZMYND12Q9H0C1 365 aa28.25■■■□□ 2.11
TMEM54-205ENST00000475208 TLE6Q9H808 572 aa28.25■■■□□ 2.11
TMEM54-205ENST00000475208 TCEAL9Q9UHQ7 104 aa28.25■■■□□ 2.11
TMEM54-205ENST00000475208 MAFBQ9Y5Q3 323 aaPredicted RBP28.25■■■□□ 2.11
TMEM54-205ENST00000475208 PIEZO1Q92508 2521 aa28.25■■■□□ 2.11
TMEM54-205ENST00000475208 CCDC196A0A1B0GTZ2 297 aa28.24■■■□□ 2.11
TMEM54-205ENST00000475208 VTNP04004 478 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms