RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 URI1O94763 535 aaPredicted RBP23.92■■□□□ 1.42
CCM2-206ENST00000474617 PRPF6O94906 941 aaKnown RBP23.92■■□□□ 1.42
CCM2-206ENST00000474617 LCA5LO95447 670 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 AFPP02771 609 aaKnown RBP23.92■■□□□ 1.42
CCM2-206ENST00000474617 RSPH10BP0C881 870 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 MYCLP12524 364 aaPredicted RBP23.92■■□□□ 1.42
CCM2-206ENST00000474617 HOXD13P35453 343 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 PSMC2P35998 433 aaKnown RBP23.92■■□□□ 1.42
CCM2-206ENST00000474617 PPATQ06203 517 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 DGKZQ13574 1117 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 USP50Q70EL3 339 aaPredicted RBP23.92■■□□□ 1.42
CCM2-206ENST00000474617 BANK1Q8NDB2 785 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 GBP3Q9H0R5 595 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 LZTFL1Q9NQ48 299 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 FAM207AQ9NSI2 230 aaPredicted RBP23.92■■□□□ 1.42
CCM2-206ENST00000474617 CYP39A1Q9NYL5 469 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 ZNF215Q9UL58 517 aaPredicted RBP23.92■■□□□ 1.42
CCM2-206ENST00000474617 ASTN1O14525 1302 aa23.92■■□□□ 1.42
CCM2-206ENST00000474617 CTAGE9A4FU28 777 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 CXCL11O14625 94 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 SCP2P22307 547 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 ANXA13P27216 316 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 RARRES1P49788 294 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 MAPK8IP2Q13387 824 aaPredicted RBP23.91■■□□□ 1.42
CCM2-206ENST00000474617 VGLL4Q14135 290 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 PDXDC1Q6P996 788 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 LBX2Q6XYB7 198 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 OTUD6AQ7L8S5 288 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 MNS1Q8NEH6 495 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 ATP6V0A1Q93050 837 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 HVCN1Q96D96 273 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 L3MBTL3Q96JM7 780 aaPredicted RBP23.91■■□□□ 1.42
CCM2-206ENST00000474617 STRA6Q9BX79 667 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 FHDC1Q9C0D6 1143 aaPredicted RBP23.91■■□□□ 1.42
CCM2-206ENST00000474617 C17orf75Q9HAS0 396 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 PCDHA10Q9Y5I2 948 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 WDR90Q96KV7 1748 aa23.91■■□□□ 1.42
CCM2-206ENST00000474617 COL11A1P12107 1806 aaPredicted RBP23.91■■□□□ 1.42
CCM2-206ENST00000474617 YWHABP31946 246 aaKnown RBP23.9■■□□□ 1.42
CCM2-206ENST00000474617 NCBP1Q09161 790 aaKnown RBP23.9■■□□□ 1.42
CCM2-206ENST00000474617 KCNH2Q12809 1159 aa23.9■■□□□ 1.42
CCM2-206ENST00000474617 PPP2R5AQ15172 486 aa23.9■■□□□ 1.42
CCM2-206ENST00000474617 DPY19L2Q6NUT2 758 aa23.9■■□□□ 1.42
CCM2-206ENST00000474617 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.9■■□□□ 1.42
CCM2-206ENST00000474617 ACRBPQ8NEB7 543 aa23.9■■□□□ 1.42
CCM2-206ENST00000474617 BAP1Q92560 729 aa23.9■■□□□ 1.42
CCM2-206ENST00000474617 WDR24Q96S15 920 aa23.9■■□□□ 1.42
CCM2-206ENST00000474617 FIZ1Q96SL8 496 aa23.9■■□□□ 1.42
CCM2-206ENST00000474617 MOV10L1Q9BXT6 1211 aaKnown RBP23.9■■□□□ 1.42
CCM2-206ENST00000474617 RNF181Q9P0P0 153 aa23.9■■□□□ 1.42
CCM2-206ENST00000474617 WRAP73Q9P2S5 460 aaPredicted RBP23.9■■□□□ 1.42
CCM2-206ENST00000474617 TESPA1A2RU30 521 aaPredicted RBP23.89■■□□□ 1.42
CCM2-206ENST00000474617 EFCAB8A8MWE9 144 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 USO1O60763 962 aaKnown RBP23.89■■□□□ 1.42
CCM2-206ENST00000474617 HIP1RO75146 1068 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 PPP1R37O75864 691 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 PLS3P13797 630 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 ARHGAP25P42331 645 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 KLK7P49862 253 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 PRAMEF18Q5VWM3 479 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 KIAA1328Q86T90 577 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 C12orf56Q8IXR9 622 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 PDCL3Q9H2J4 239 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 FRMD4BQ9Y2L6 1034 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 RIPK3Q9Y572 518 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 MRFAP1Q9Y605 127 aa23.89■■□□□ 1.42
CCM2-206ENST00000474617 GOLGB1Q14789 3259 aaKnown RBP23.89■■□□□ 1.41
CCM2-206ENST00000474617 DDX39AO00148 427 aaKnown RBP23.89■■□□□ 1.41
CCM2-206ENST00000474617 DDNO94850 711 aaPredicted RBP23.89■■□□□ 1.41
CCM2-206ENST00000474617 KCNMA1Q12791 1236 aa23.89■■□□□ 1.41
CCM2-206ENST00000474617 SLC9C1Q4G0N8 1177 aa23.89■■□□□ 1.41
CCM2-206ENST00000474617 PDCL2Q8N4E4 241 aa23.89■■□□□ 1.41
CCM2-206ENST00000474617 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.89■■□□□ 1.41
CCM2-206ENST00000474617 BZW2Q9Y6E2 419 aaKnown RBP23.89■■□□□ 1.41
CCM2-206ENST00000474617 A0A0G2JMZ2 1700 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 MAPK13O15264 365 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 TGFB1I1O43294 461 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 SERPING1P05155 500 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 PSAPP07602 524 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 ICAM3P32942 547 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 VAV2P52735 878 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 MAPK7Q13164 816 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 ZNF569Q5MCW4 686 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 SFMBT2Q5VUG0 894 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.88■■□□□ 1.41
CCM2-206ENST00000474617 RRAGAQ7L523 313 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 ERO1BQ86YB8 467 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 RIOX2Q8IUF8 465 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 ANKRD13AQ8IZ07 590 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 WNK4Q96J92 1243 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 NAPGQ99747 312 aaPredicted RBP23.88■■□□□ 1.41
CCM2-206ENST00000474617 DEF6Q9H4E7 631 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 A1CFQ9NQ94 594 aaKnown RBP23.88■■□□□ 1.41
CCM2-206ENST00000474617 DMAC2Q9NW81 257 aa23.88■■□□□ 1.41
CCM2-206ENST00000474617 ZMYM2Q9UBW7 1377 aa23.87■■□□□ 1.41
CCM2-206ENST00000474617 UNCXA6NJT0 531 aa23.87■■□□□ 1.41
CCM2-206ENST00000474617 KIF5AQ12840 1032 aa23.87■■□□□ 1.41
CCM2-206ENST00000474617 GBP6Q6ZN66 633 aa23.87■■□□□ 1.41
CCM2-206ENST00000474617 CEP112Q8N8E3 955 aa23.87■■□□□ 1.41
CCM2-206ENST00000474617 ACCSQ96QU6 501 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms