RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 RNF180Q86T96 592 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 VSIG1Q86XK7 387 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CRACR2BQ8N4Y2 399 aaPredicted RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 MAB21L3Q8N8X9 362 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PCSK9Q8NBP7 692 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 SLC4A11Q8NBS3 891 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 EXOC6Q8TAG9 804 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 FBXO30Q8TB52 745 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 AGR3Q8TD06 166 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PEX13Q92968 403 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 LRRC59Q96AG4 307 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 NEUROD4Q9HD90 331 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 INIPQ9NRY2 104 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 DACT1Q9NYF0 836 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 AATKQ6ZMQ8 1374 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 OR6C65A6NJZ3 312 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PIK3CDO00329 1044 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SOCS7O14512 581 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SPTLC1O15269 473 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ST8SIA5O15466 376 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ACTN4O43707 911 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 TRPA1O75762 1119 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 KRT14P02533 472 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 RETP07949 1114 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SELLP14151 372 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 HSPA6P17066 643 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PRKACBP22694 351 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NOS3P29474 1203 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 STAT1P42224 750 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CBX5P45973 191 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 VPS41P49754 854 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 CPT1AP50416 773 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PTPN5P54829 565 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NLRP6P59044 892 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 GSTM4Q03013 218 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 TRPC3Q13507 836 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 FRG1Q14331 258 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 GRM3Q14832 879 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 MEA1Q16626 185 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 MAPKAPK3Q16644 382 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 FYB2Q5VWT5 728 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 FAM205BPQ63HN1 556 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 RCSD1Q6JBY9 416 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ANKS3Q6ZW76 656 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NOSTRINQ8IVI9 506 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SMC1BQ8NDV3 1235 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 KAT2BQ92831 832 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NCLNQ969V3 563 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 HDAC11Q96DB2 347 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 DTNBP1Q96EV8 351 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ARL5BQ96KC2 179 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 MPHOSPH9Q99550 1183 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ERP44Q9BS26 406 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SLC12A5Q9H2X9 1139 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NTN4Q9HB63 628 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ST7Q9NRC1 585 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 STAG3Q9UJ98 1225 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ZNF180Q9UJW8 692 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 GJD2Q9UKL4 321 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 RNF112Q9ULX5 631 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 KCNH4Q9UQ05 1017 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NPC1L1Q9UHC9 1359 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NACADO15069 1562 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 KIAA1217Q5T5P2 1943 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PTPRGP23470 1445 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ALG1L2C9J202 215 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 F5H423 210 aaPredicted RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 FYB1O15117 783 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 FOXP2O15409 715 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 BRINP1O60477 761 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 DDX58O95786 925 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 APEHP13798 732 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 CDH3P22223 829 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 IL10P22301 178 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 LSP1P33241 339 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ZAP70P43403 619 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 FNTAP49354 379 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 NIPAL4Q0D2K0 466 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 E2F2Q14209 437 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SNX30Q5VWJ9 437 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PM20D1Q6GTS8 502 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 WDR73Q6P4I2 378 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PPP1R21Q6ZMI0 780 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 GTF3C2Q8WUA4 911 aaPredicted RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 SPDL1Q96EA4 605 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 VCPIP1Q96JH7 1222 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 TNIP3Q96KP6 325 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 PIP5K1AQ99755 562 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 DDX50Q9BQ39 737 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 LPIN3Q9BQK8 851 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ADPGKQ9BRR6 497 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 ISCA1Q9BUE6 129 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 MENTQ9BUN1 341 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 DDX23Q9BUQ8 820 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 PSTPIP2Q9H939 334 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 MRS2Q9HD23 443 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 KCND1Q9NSA2 647 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 SEPT11Q9NVA2 429 aaKnown RBP3.8□□□□□ -1.8
UBR3-208ENST00000474426 KLHL11Q9NVR0 708 aa3.8□□□□□ -1.8
UBR3-208ENST00000474426 BAG5Q9UL15 447 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms