RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 CDHR5Q9HBB8 845 aa28.16■■■□□ 2.1
PKD1-211ENST00000474088 TBC1D22BQ9NU19 505 aa28.16■■■□□ 2.1
PKD1-211ENST00000474088 FAM50BQ9Y247 325 aa28.16■■■□□ 2.1
PKD1-211ENST00000474088 SNX14Q9Y5W7 946 aa28.16■■■□□ 2.1
PKD1-211ENST00000474088 CAMK1Q14012 370 aa28.15■■■□□ 2.1
PKD1-211ENST00000474088 NAALADL2Q58DX5 795 aa28.15■■■□□ 2.1
PKD1-211ENST00000474088 REXO1Q8N1G1 1221 aaKnown RBP28.15■■■□□ 2.1
PKD1-211ENST00000474088 FBXL16Q8N461 479 aa28.15■■■□□ 2.1
PKD1-211ENST00000474088 LRFN2Q9ULH4 789 aa28.15■■■□□ 2.1
PKD1-211ENST00000474088 GINS2Q9Y248 185 aa28.15■■■□□ 2.1
PKD1-211ENST00000474088 NID2Q14112 1375 aa28.14■■■□□ 2.1
PKD1-211ENST00000474088 ZBTB42B2RXF5 422 aa28.14■■■□□ 2.1
PKD1-211ENST00000474088 GNA11P29992 359 aa28.14■■■□□ 2.1
PKD1-211ENST00000474088 SETQ01105 290 aaPredicted RBP28.14■■■□□ 2.1
PKD1-211ENST00000474088 PAN2Q504Q3 1202 aaKnown RBP28.14■■■□□ 2.1
PKD1-211ENST00000474088 ZNF746Q6NUN9 644 aaPredicted RBP28.14■■■□□ 2.1
PKD1-211ENST00000474088 ERVK-5Q9HDB9 667 aa28.14■■■□□ 2.1
PKD1-211ENST00000474088 NOC2LQ9Y3T9 749 aaKnown RBP28.14■■■□□ 2.1
PKD1-211ENST00000474088 MAFBQ9Y5Q3 323 aaPredicted RBP28.14■■■□□ 2.1
PKD1-211ENST00000474088 RPS6KA5O75582 802 aa28.13■■■□□ 2.09
PKD1-211ENST00000474088 PLA2G5P39877 138 aa28.13■■■□□ 2.09
PKD1-211ENST00000474088 CKAP2LQ8IYA6 745 aa28.13■■■□□ 2.09
PKD1-211ENST00000474088 SPPL3Q8TCT6 385 aa28.13■■■□□ 2.09
PKD1-211ENST00000474088 BBXQ8WY36 941 aaPredicted RBP28.13■■■□□ 2.09
PKD1-211ENST00000474088 PHKBQ93100 1093 aa28.13■■■□□ 2.09
PKD1-211ENST00000474088 AGXT2Q9BYV1 514 aa28.13■■■□□ 2.09
PKD1-211ENST00000474088 LOXHD1Q8IVV2 1947 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 FAM86C2PA6NEL3 165 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 MGEA5O60502 916 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 CSPG5O95196 566 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 ITGB1P05556 798 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 SARSP49591 514 aaKnown RBP28.12■■■□□ 2.09
PKD1-211ENST00000474088 AKAP17AQ02040 695 aaKnown RBP28.12■■■□□ 2.09
PKD1-211ENST00000474088 DLX2Q07687 328 aaPredicted RBP28.12■■■□□ 2.09
PKD1-211ENST00000474088 ODR4Q5SWX8 454 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 SMAP1Q8IYB5 467 aaPredicted RBP28.12■■■□□ 2.09
PKD1-211ENST00000474088 TMEM40Q8WWA1 233 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 IGFLR1Q9H665 355 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 PRKAG3Q9UGI9 489 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 PCDHB7Q9Y5E2 793 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 PCDHA10Q9Y5I2 948 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 ATG2AQ2TAZ0 1938 aa28.12■■■□□ 2.09
PKD1-211ENST00000474088 C22orf31O95567 290 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 RPS6KB1P23443 525 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 DNAJB1P25685 340 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 CIITAP33076 1130 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 GTF2F1P35269 517 aaKnown RBP eCLIP28.11■■■□□ 2.09
PKD1-211ENST00000474088 GATMP50440 423 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 NTRK3Q16288 839 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 PRR16Q569H4 304 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 KLHL23Q8NBE8 558 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 FAM122AQ96E09 287 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 ST3GAL5Q9UNP4 418 aa28.11■■■□□ 2.09
PKD1-211ENST00000474088 GPR182O15218 404 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 PSAPP07602 524 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 ALADP13716 330 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 ZP2Q05996 745 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 TRMT1LQ7Z2T5 733 aaKnown RBP28.1■■■□□ 2.09
PKD1-211ENST00000474088 BICD2Q8TD16 824 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 RASGRP4Q8TDF6 673 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 ADAM2Q99965 735 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 RNF26Q9BY78 433 aaPredicted RBP28.1■■■□□ 2.09
PKD1-211ENST00000474088 RGS18Q9NS28 235 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 C1orf112Q9NSG2 853 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 HCN4Q9Y3Q4 1203 aa28.1■■■□□ 2.09
PKD1-211ENST00000474088 ARIH1Q9Y4X5 557 aaPredicted RBP28.1■■■□□ 2.09
PKD1-211ENST00000474088 DENND3A2RUS2 1198 aa28.09■■■□□ 2.09
PKD1-211ENST00000474088 IBSPP21815 317 aaPredicted RBP28.09■■■□□ 2.09
PKD1-211ENST00000474088 CRYBB1P53674 252 aaPredicted RBP28.09■■■□□ 2.09
PKD1-211ENST00000474088 ADAM15Q13444 863 aa28.09■■■□□ 2.09
PKD1-211ENST00000474088 RNF216Q9NWF9 866 aaPredicted RBP28.09■■■□□ 2.09
PKD1-211ENST00000474088 GABBR1Q9UBS5 961 aa28.09■■■□□ 2.09
PKD1-211ENST00000474088 TCEAL9Q9UHQ7 104 aa28.09■■■□□ 2.09
PKD1-211ENST00000474088 C19orf67A6NJJ6 358 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 C9IYK1 514 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 LINC01565O15544 149 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 PPFIA3O75145 1194 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 PSMA5P28066 241 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 CLUL1Q15846 466 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 KIZQ2M2Z5 673 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 SLC24A5Q71RS6 500 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 ADHFE1Q8IWW8 467 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 METTL13Q8N6R0 699 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 CCDC148Q8NFR7 591 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 POF1BQ8WVV4 589 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 PPP2R3CQ969Q6 453 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 LENG9Q96B70 501 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 PPP1R16BQ96T49 567 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 OSMRQ99650 979 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 SLC26A6Q9BXS9 759 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 CEP131Q9UPN4 1083 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 SAMM50Q9Y512 469 aa28.08■■■□□ 2.09
PKD1-211ENST00000474088 MBTPS2O43462 519 aa28.07■■■□□ 2.08
PKD1-211ENST00000474088 GPR32O75388 356 aa28.07■■■□□ 2.08
PKD1-211ENST00000474088 IFNAR1P17181 557 aa28.07■■■□□ 2.08
PKD1-211ENST00000474088 SMAD2Q15796 467 aaKnown RBP28.07■■■□□ 2.08
PKD1-211ENST00000474088 KIAA1671Q9BY89 1806 aa28.06■■■□□ 2.08
PKD1-211ENST00000474088 EDIL3O43854 480 aa28.06■■■□□ 2.08
PKD1-211ENST00000474088 TBX10O75333 385 aa28.06■■■□□ 2.08
PKD1-211ENST00000474088 VTNP04004 478 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms