RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 IFIT1BQ5T764 474 aaKnown RBP18.65■□□□□ 0.58
HPS4-210ENST00000473782 CYB5R4Q7L1T6 521 aa18.65■□□□□ 0.58
HPS4-210ENST00000473782 FLCNQ8NFG4 579 aa18.65■□□□□ 0.58
HPS4-210ENST00000473782 CASP10Q92851 521 aa18.65■□□□□ 0.58
HPS4-210ENST00000473782 GLG1Q92896 1179 aa18.65■□□□□ 0.58
HPS4-210ENST00000473782 CNTNAP3BQ96NU0 1288 aa18.65■□□□□ 0.58
HPS4-210ENST00000473782 ADAM2Q99965 735 aa18.65■□□□□ 0.58
HPS4-210ENST00000473782 CNTNAP3Q9BZ76 1288 aa18.65■□□□□ 0.58
HPS4-210ENST00000473782 NGRNQ9NPE2 291 aaKnown RBP18.65■□□□□ 0.58
HPS4-210ENST00000473782 NOC2LQ9Y3T9 749 aaKnown RBP18.65■□□□□ 0.58
HPS4-210ENST00000473782 LAMA4Q16363 1823 aa18.65■□□□□ 0.58
HPS4-210ENST00000473782 ACACBO00763 2458 aa18.64■□□□□ 0.58
HPS4-210ENST00000473782 C2orf71A6NGG8 1288 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 CLASP2O75122 1294 aaKnown RBP18.64■□□□□ 0.57
HPS4-210ENST00000473782 RPLP2P05387 115 aaKnown RBP18.64■□□□□ 0.57
HPS4-210ENST00000473782 PDE4AP27815 886 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 PBX3P40426 434 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 NFX1Q12986 1120 aaKnown RBP18.64■□□□□ 0.57
HPS4-210ENST00000473782 GRM4Q14833 912 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 TPRNQ4KMQ1 711 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 XRRA1Q6P2D8 792 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 C12orf76Q8N812 135 aaPredicted RBP18.64■□□□□ 0.57
HPS4-210ENST00000473782 MRPL43Q8N983 215 aaKnown RBP18.64■□□□□ 0.57
HPS4-210ENST00000473782 DTWD2Q8NBA8 298 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 GIMAP8Q8ND71 665 aaPredicted RBP18.64■□□□□ 0.57
HPS4-210ENST00000473782 MFSD1Q9H3U5 465 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 SENP2Q9HC62 589 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 ENTPD7Q9NQZ7 604 aa18.64■□□□□ 0.57
HPS4-210ENST00000473782 SMIM35A0A1B0GVV1 85 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 LAG3P18627 525 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 KRT76Q01546 638 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 PLCB4Q15147 1175 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 SLC24A5Q71RS6 500 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 NLRX1Q86UT6 975 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 KIAA2013Q8IYS2 634 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 GPRASP2Q96D09 838 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 CASD1Q96PB1 797 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 DLL3Q9NYJ7 618 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 CFAP47Q6ZTR5 3102 aa18.63■□□□□ 0.57
HPS4-210ENST00000473782 GPR179Q6PRD1 2367 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 PIK3CDO00329 1044 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 LMNAP02545 664 aaKnown RBP18.62■□□□□ 0.57
HPS4-210ENST00000473782 SDSP20132 328 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 CES5AQ6NT32 575 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 KCNT2Q6UVM3 1135 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 NME8Q8N427 588 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 C1orf112Q9NSG2 853 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 ST3GAL5Q9UNP4 418 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 USTQ9Y2C2 406 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 UBIAD1Q9Y5Z9 338 aa18.62■□□□□ 0.57
HPS4-210ENST00000473782 M0QZ92 97 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 MTHFRP42898 656 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 TRAF1Q13077 416 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 DSC3Q14574 896 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 PUM1Q14671 1186 aaKnown RBP eCLIP18.61■□□□□ 0.57
HPS4-210ENST00000473782 ANKRD45Q5TZF3 282 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 KIAA1841Q6NSI8 718 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 MTHFD1LQ6UB35 978 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 TMC7Q7Z402 723 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 TDRD5Q8NAT2 981 aaKnown RBP18.61■□□□□ 0.57
HPS4-210ENST00000473782 UBAC1Q9BSL1 405 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 TMEM161AQ9NX61 479 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 PKD2L1Q9P0L9 805 aa18.61■□□□□ 0.57
HPS4-210ENST00000473782 PUF60Q9UHX1 559 aaKnown RBP18.61■□□□□ 0.57
HPS4-210ENST00000473782 SPTBN2O15020 2390 aa18.6■□□□□ 0.57
HPS4-210ENST00000473782 EOMESO95936 686 aa18.6■□□□□ 0.57
HPS4-210ENST00000473782 TROAPQ12815 778 aa18.6■□□□□ 0.57
HPS4-210ENST00000473782 RARS2Q5T160 578 aaKnown RBP18.6■□□□□ 0.57
HPS4-210ENST00000473782 KIAA0319LQ8IZA0 1049 aa18.6■□□□□ 0.57
HPS4-210ENST00000473782 KRT23Q9C075 422 aa18.6■□□□□ 0.57
HPS4-210ENST00000473782 ELAC1Q9H777 363 aaKnown RBP18.6■□□□□ 0.57
HPS4-210ENST00000473782 R4GN57 208 aa18.6■□□□□ 0.57
HPS4-210ENST00000473782 DENND3A2RUS2 1198 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 RPS6KA5O75582 802 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 FAM43BQ6ZT52 329 aaPredicted RBP18.59■□□□□ 0.57
HPS4-210ENST00000473782 FAM228AQ86W67 206 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 PLCD3Q8N3E9 789 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 SMARCC2Q8TAQ2 1214 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 RTP3Q9BQQ7 232 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 TMEM117Q9H0C3 514 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 SEMA4AQ9H3S1 761 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 ATP6V0A4Q9HBG4 840 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 CYP26B1Q9NR63 512 aa18.59■□□□□ 0.57
HPS4-210ENST00000473782 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.56
HPS4-210ENST00000473782 SMC1AQ14683 1233 aaKnown RBP18.58■□□□□ 0.56
HPS4-210ENST00000473782 PLPPR4Q7Z2D5 763 aa18.58■□□□□ 0.56
HPS4-210ENST00000473782 SLC39A11Q8N1S5 342 aa18.58■□□□□ 0.56
HPS4-210ENST00000473782 DCLK2Q8N568 766 aa18.58■□□□□ 0.56
HPS4-210ENST00000473782 KCNG4Q8TDN1 519 aa18.58■□□□□ 0.56
HPS4-210ENST00000473782 PIBF1Q8WXW3 757 aa18.58■□□□□ 0.56
HPS4-210ENST00000473782 CDHR1Q96JP9 859 aa18.58■□□□□ 0.56
HPS4-210ENST00000473782 DSCC1Q9BVC3 393 aa18.58■□□□□ 0.56
HPS4-210ENST00000473782 DUSP12Q9UNI6 340 aa18.58■□□□□ 0.56
HPS4-210ENST00000473782 GINS2Q9Y248 185 aa18.58■□□□□ 0.56
HPS4-210ENST00000473782 EPCAMP16422 314 aa18.57■□□□□ 0.56
HPS4-210ENST00000473782 KLRC1P26715 233 aa18.57■□□□□ 0.56
HPS4-210ENST00000473782 TDGQ13569 410 aa18.57■□□□□ 0.56
HPS4-210ENST00000473782 MTMR1Q13613 665 aa18.57■□□□□ 0.56
HPS4-210ENST00000473782 IMMTQ16891 758 aaKnown RBP18.57■□□□□ 0.56
HPS4-210ENST00000473782 ATAT1Q5SQI0 421 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms