RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 JAM2P57087 298 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 NNTQ13423 1086 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 RRP1BQ14684 758 aaKnown RBP11.98□□□□□ -0.49
C9orf3-214ENST00000473778 EXOC3L4Q17RC7 722 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 HHIPL2Q6UWX4 724 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 FRMD5Q7Z6J6 570 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 KIAA0825Q8IV33 1275 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 KSR1Q8IVT5 923 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 TEKT1Q969V4 418 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 AP1M1Q9BXS5 423 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 PLCB1Q9NQ66 1216 aa11.98□□□□□ -0.49
C9orf3-214ENST00000473778 COL11A2P13942 1736 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-214ENST00000473778 KIF4AO95239 1232 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 SKOR1P84550 965 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 PPARDQ03181 441 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 CERKLQ49MI3 558 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-214ENST00000473778 Q4G0T1 1027 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 ALKBH5Q6P6C2 394 aaKnown RBP11.97□□□□□ -0.49
C9orf3-214ENST00000473778 SLFN12Q8IYM2 578 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 PIGOQ8TEQ8 1089 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 BORCS6Q96GS4 357 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 RNPC3Q96LT9 517 aaKnown RBP11.97□□□□□ -0.49
C9orf3-214ENST00000473778 SPAG5Q96R06 1193 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 ZNF646O15015 1829 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-214ENST00000473778 BTNL10A8MVZ5 291 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 F5H6K3 240 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 DDX3XO00571 662 aaKnown RBP eCLIP11.97□□□□□ -0.49
C9orf3-214ENST00000473778 NR3C1P04150 777 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 XRCC5P13010 732 aaKnown RBP11.97□□□□□ -0.49
C9orf3-214ENST00000473778 MAGEA9P43362 315 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 KLRC3Q07444 240 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 COG2Q14746 738 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 TTC31Q49AM3 519 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-214ENST00000473778 TCERG1LQ5VWI1 586 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 METTL13Q8N6R0 699 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 SCFD2Q8WU76 684 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 GJD4Q96KN9 370 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-214ENST00000473778 DNM3Q9UQ16 869 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 SAMM50Q9Y512 469 aa11.97□□□□□ -0.49
C9orf3-214ENST00000473778 PDXKO00764 312 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 OPA1O60313 960 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 GCNT3O95395 438 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 NDUFB10O96000 172 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 ITGA4P13612 1032 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 FLT3P36888 993 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 SREBF1P36956 1147 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 GUCY1A3Q02108 690 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 PAK2Q13177 524 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 AP3B2Q13367 1082 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 RPS6KA1Q15418 735 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 UAP1Q16222 522 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-214ENST00000473778 ZC2HC1CQ53FD0 456 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-214ENST00000473778 MOXD1Q6UVY6 613 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 MREGQ8N565 214 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 GPATCH11Q8N954 259 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 OR2W6PQ8NHA6 318 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 TPCN2Q8NHX9 752 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 DDX47Q9H0S4 455 aaKnown RBP11.96□□□□□ -0.49
C9orf3-214ENST00000473778 LRRC4CQ9HCJ2 640 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 GCNT4Q9P109 453 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 NYAP2Q9P242 653 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
C9orf3-214ENST00000473778 A0A1W2PRG0 241 aa11.96□□□□□ -0.5
C9orf3-214ENST00000473778 NMT1P30419 496 aaKnown RBP11.96□□□□□ -0.5
C9orf3-214ENST00000473778 PRKCIP41743 596 aa11.96□□□□□ -0.5
C9orf3-214ENST00000473778 ICA1Q05084 483 aa11.96□□□□□ -0.5
C9orf3-214ENST00000473778 CTTNQ14247 550 aaKnown RBP11.96□□□□□ -0.5
C9orf3-214ENST00000473778 BMT2Q1RMZ1 405 aa11.96□□□□□ -0.5
C9orf3-214ENST00000473778 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.5
C9orf3-214ENST00000473778 DCAF4Q8WV16 495 aa11.96□□□□□ -0.5
C9orf3-214ENST00000473778 CCDC17Q96LX7 622 aa11.96□□□□□ -0.5
C9orf3-214ENST00000473778 ZDHHC15Q96MV8 337 aa11.96□□□□□ -0.5
C9orf3-214ENST00000473778 AMNQ9BXJ7 453 aa11.96□□□□□ -0.5
C9orf3-214ENST00000473778 OSGEPQ9NPF4 335 aa11.96□□□□□ -0.5
C9orf3-214ENST00000473778 UTRNP46939 3433 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 IGLV3-22A0A075B6J6 115 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 BHMG1C9JSJ3 638 aaPredicted RBP11.95□□□□□ -0.5
C9orf3-214ENST00000473778 CEP104O60308 925 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 KIAA1755Q5JYT7 1200 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 CFAP58Q5T655 872 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 RINT1Q6NUQ1 792 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 TATDN1Q6P1N9 297 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 FIZ1Q96SL8 496 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 RUFY1Q96T51 708 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 NAP1L4Q99733 375 aaKnown RBP11.95□□□□□ -0.5
C9orf3-214ENST00000473778 EIF2AK1Q9BQI3 630 aaKnown RBP11.95□□□□□ -0.5
C9orf3-214ENST00000473778 WDR18Q9BV38 432 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 LUC7LQ9NQ29 371 aaKnown RBP11.95□□□□□ -0.5
C9orf3-214ENST00000473778 TYW1Q9NV66 732 aaKnown RBP11.95□□□□□ -0.5
C9orf3-214ENST00000473778 WRAP73Q9P2S5 460 aaPredicted RBP11.95□□□□□ -0.5
C9orf3-214ENST00000473778 STXBP5LQ9Y2K9 1186 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 NOC2LQ9Y3T9 749 aaKnown RBP11.95□□□□□ -0.5
C9orf3-214ENST00000473778 NR2E1Q9Y466 385 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 IGSF9BQ9UPX0 1349 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 SLX4Q8IY92 1834 aa11.95□□□□□ -0.5
C9orf3-214ENST00000473778 H0YGN5 161 aa11.94□□□□□ -0.5
C9orf3-214ENST00000473778 SART1O43290 800 aaKnown RBP11.94□□□□□ -0.5
C9orf3-214ENST00000473778 GFPT2O94808 682 aa11.94□□□□□ -0.5
C9orf3-214ENST00000473778 GBP6Q6ZN66 633 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms