RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 NME8Q8N427 588 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 GJA10Q969M2 543 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 FTHL17Q9BXU8 183 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 AGXT2Q9BYV1 514 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 UPF3BQ9BZI7 483 aaKnown RBP13.54□□□□□ -0.24
SMPD4-217ENST00000473720 NSUN3Q9H649 340 aaKnown RBP13.54□□□□□ -0.24
SMPD4-217ENST00000473720 IGFLR1Q9H665 355 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 ALG13Q9NP73 1137 aaKnown RBP13.54□□□□□ -0.24
SMPD4-217ENST00000473720 TBC1D22BQ9NU19 505 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 CLDND1Q9NY35 253 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 CYP46A1Q9Y6A2 500 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 ARID2Q68CP9 1835 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 DENND3A2RUS2 1198 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 STAG3L1P0CL83 205 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 IL9P15248 144 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 KIZQ2M2Z5 673 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 ZNF484Q5JVG2 852 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 SPOUT1Q5T280 376 aaKnown RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 PTCRAQ6ISU1 281 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 ZNF746Q6NUN9 644 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 NPAS4Q8IUM7 802 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 CRYGNQ8WXF5 182 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 ZNF689Q96CS4 500 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 ZNF668Q96K58 619 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 OSMRQ99650 979 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 C11orf84Q9BUA3 381 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 AKT3Q9Y243 479 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 NOC2LQ9Y3T9 749 aaKnown RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 RWDD3Q9Y3V2 267 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 PCDHA10Q9Y5I2 948 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 MRPL42Q9Y6G3 142 aaKnown RBP13.53□□□□□ -0.24
SMPD4-217ENST00000473720 SQORQ9Y6N5 450 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 COL1A2P08123 1366 aa13.53□□□□□ -0.24
SMPD4-217ENST00000473720 ZBTB42B2RXF5 422 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 MGEA5O60502 916 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 DTNBO60941 627 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 CLCN3P51790 818 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 CLUL1Q15846 466 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 SMAP1Q8IYB5 467 aaPredicted RBP13.52□□□□□ -0.25
SMPD4-217ENST00000473720 KIAA0319LQ8IZA0 1049 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 FBXL16Q8N461 479 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 TBCKQ8TEA7 893 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 TMEM40Q8WWA1 233 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 BBXQ8WY36 941 aaPredicted RBP13.52□□□□□ -0.25
SMPD4-217ENST00000473720 AIFM3Q96NN9 605 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 ADAM2Q99965 735 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 EPHX3Q9H6B9 360 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 RC3H2Q9HBD1 1191 aaKnown RBP13.52□□□□□ -0.25
SMPD4-217ENST00000473720 ZSWIM6Q9HCJ5 1215 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 PCDHB7Q9Y5E2 793 aa13.52□□□□□ -0.25
SMPD4-217ENST00000473720 KDM3AQ9Y4C1 1321 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 C5orf67F2Z3F1 127 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 MSH4O15457 936 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 GAS7O60861 476 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 C22orf31O95567 290 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 RB1P06400 928 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 LINC00271P0C7V0 271 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 SSTR3P32745 418 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-217ENST00000473720 LEXMQ3ZCV2 418 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 LRCH2Q5VUJ6 765 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 LRRC71Q8N4P6 559 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 KHSRPQ92945 711 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMPD4-217ENST00000473720 CLP1Q92989 425 aaKnown RBP13.51□□□□□ -0.25
SMPD4-217ENST00000473720 ERVK-5Q9HDB9 667 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 DISC1Q9NRI5 854 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 PDRG1Q9NUG6 133 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 ST3GAL5Q9UNP4 418 aa13.51□□□□□ -0.25
SMPD4-217ENST00000473720 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-217ENST00000473720 TBKBP1A7MCY6 615 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 WDR64B1ANS9 1081 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 CIITAP33076 1130 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 GTF2F1P35269 517 aaKnown RBP eCLIP13.5□□□□□ -0.257e-8■■□□□ 11.7
SMPD4-217ENST00000473720 SARSP49591 514 aaKnown RBP13.5□□□□□ -0.25
SMPD4-217ENST00000473720 PRKCEQ02156 737 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 UGCGQ16739 394 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 ODR4Q5SWX8 454 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 CPLX2Q6PUV4 134 aaKnown RBP13.5□□□□□ -0.25
SMPD4-217ENST00000473720 CMTR2Q8IYT2 770 aaKnown RBP13.5□□□□□ -0.25
SMPD4-217ENST00000473720 LENG9Q96B70 501 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 SCLT1Q96NL6 688 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 TEKT3Q9BXF9 490 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 UNC45AQ9H3U1 944 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 CD320Q9NPF0 282 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 SH3GLB2Q9NR46 395 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 PLAGL2Q9UPG8 496 aa13.5□□□□□ -0.25
SMPD4-217ENST00000473720 C5orf42Q9H799 3197 aa13.49□□□□□ -0.25
SMPD4-217ENST00000473720 FAM86C2PA6NEL3 165 aa13.49□□□□□ -0.25
SMPD4-217ENST00000473720 GPR182O15218 404 aa13.49□□□□□ -0.25
SMPD4-217ENST00000473720 EDIL3O43854 480 aa13.49□□□□□ -0.25
SMPD4-217ENST00000473720 DEXIO95424 95 aa13.49□□□□□ -0.25
SMPD4-217ENST00000473720 TDP2O95551 362 aa13.49□□□□□ -0.25
SMPD4-217ENST00000473720 OATP04181 439 aa13.49□□□□□ -0.25
SMPD4-217ENST00000473720 ITGB1P05556 798 aa13.49□□□□□ -0.25
SMPD4-217ENST00000473720 USP11P51784 963 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms