RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 MAIP1Q8WWC4 291 aa6.65□□□□□ -1.34
HERC4-209ENST00000473533 TLCD1Q96CP7 247 aa6.65□□□□□ -1.34
HERC4-209ENST00000473533 KCTD10Q9H3F6 313 aa6.65□□□□□ -1.34
HERC4-209ENST00000473533 VAT1LQ9HCJ6 419 aa6.65□□□□□ -1.34
HERC4-209ENST00000473533 SMARCAL1Q9NZC9 954 aa6.65□□□□□ -1.34
HERC4-209ENST00000473533 TFCP2L1Q9NZI6 479 aa6.65□□□□□ -1.34
HERC4-209ENST00000473533 ANKIB1Q9P2G1 1089 aa6.65□□□□□ -1.34
HERC4-209ENST00000473533 MTMR7Q9Y216 660 aa6.65□□□□□ -1.34
HERC4-209ENST00000473533 SUGT1Q9Y2Z0 365 aa6.65□□□□□ -1.34
HERC4-209ENST00000473533 POTEMA6NI47 508 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 SMIM22K7EJ46 135 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 RGS16O15492 202 aaPredicted RBP6.65□□□□□ -1.35
HERC4-209ENST00000473533 ZPR1O75312 459 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 TTLL1O95922 423 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 GOLGA8HP0CJ92 632 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 PDHBP11177 359 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 ATP2B4P23634 1241 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 MAN1A1P33908 653 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 ZNF131P52739 623 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 DR1Q01658 176 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 PTK2Q05397 1052 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 MKRN3Q13064 507 aaKnown RBP6.65□□□□□ -1.35
HERC4-209ENST00000473533 CRYMQ14894 314 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 LRRC41Q15345 812 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 IRF2BP2Q7Z5L9 587 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 RAPGEF5Q92565 580 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 ZKSCAN4Q969J2 545 aaPredicted RBP6.65□□□□□ -1.35
HERC4-209ENST00000473533 HVCN1Q96D96 273 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 HOOK2Q96ED9 719 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 HES6Q96HZ4 224 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 FAM20AQ96MK3 541 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 RABEP2Q9H5N1 569 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 CCDC134Q9H6E4 229 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 SEL1LQ9UBV2 794 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 MCM8Q9UJA3 840 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 CEP83Q9Y592 693 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 SNED1Q8TER0 1413 aa6.65□□□□□ -1.35
HERC4-209ENST00000473533 CYP3A7-CYP3A51PA0A087WV96 503 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 CCT8L1PA6NM43 557 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 ADAMTS3O15072 1205 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 TDP2O95551 362 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 SNHG28P0DPA3 235 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 MUTP22033 750 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 CYP3A7P24462 503 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 BTDP43251 543 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 SCTRP47872 440 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 SEC24CP53992 1094 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 PMS2P54278 862 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 HADHBP55084 474 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 SLC8A3P57103 927 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 MAGOHP61326 146 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 ERMARDQ5T6L9 678 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 SEL1L2Q5TEA6 688 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 USP17L2Q6R6M4 530 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 MAPKAPK5Q8IW41 473 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 FUKQ8N0W3 1084 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 SCFD1Q8WVM8 642 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 HPS3Q969F9 1004 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 MAGOHBQ96A72 148 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 ERP44Q9BS26 406 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 DHX36Q9H2U1 1008 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 PABPC3Q9H361 631 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 PSTPIP2Q9H939 334 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 NARFQ9UHQ1 456 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 KIAA1024Q9UPX6 916 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 STXBP5LQ9Y2K9 1186 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 COL5A3P25940 1745 aaPredicted RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 ZBTB5O15062 677 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 SLC37A4O43826 429 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 CTNND1O60716 968 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 CYP11B2P19099 503 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 PSMC2P35998 433 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 CLK2P49760 499 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 PDE6CP51160 858 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 PPP2R5AQ15172 486 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 HS2ST1Q7LGA3 356 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 ZNF571Q7Z3V5 609 aaPredicted RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 NT5DC3Q86UY8 548 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 NELFCDQ8IXH7 590 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 CCDC63Q8NA47 563 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 CEP95Q96GE4 821 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 CCDC17Q96LX7 622 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 RTFDC1Q9BY42 306 aaPredicted RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 STK33Q9BYT3 514 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 MTMR4Q9NYA4 1195 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 BAZ2BQ9UIF8 2168 aaKnown RBP6.64□□□□□ -1.35
HERC4-209ENST00000473533 COL24A1Q17RW2 1714 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 NHSQ6T4R5 1651 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 DAPK3O43293 454 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 BCRP11274 1271 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 PON1P27169 355 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 SOX5P35711 763 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 ATP2B2Q01814 1243 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 GRAPQ13588 217 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 MYBPC2Q14324 1141 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 TCEAL1Q15170 157 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 SLC35G1Q2M3R5 365 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 TCERG1LQ5VWI1 586 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 C11orf63Q6NUN7 778 aa6.64□□□□□ -1.35
HERC4-209ENST00000473533 SYT2Q8N9I0 419 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms