RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SH2B2O14492 632 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-209ENST00000473421 SGSM2O43147 1006 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 PRC1O43663 620 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 DDAH1O94760 285 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 STAG3L1P0CL83 205 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 ATP4AP20648 1035 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 SMARCA1P28370 1054 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 STAT5BP51692 787 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 SIGLEC14Q08ET2 396 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 SART3Q15020 963 aaKnown RBP14.44□□□□□ -0.1
TRAF4-209ENST00000473421 LLGL2Q6P1M3 1020 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 SUGP1Q8IWZ8 645 aaKnown RBP14.44□□□□□ -0.1
TRAF4-209ENST00000473421 COLGALT1Q8NBJ5 622 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 MAP4K1Q92918 833 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 CDHR1Q96JP9 859 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 MXRA8Q9BRK3 442 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 TLR9Q9NR96 1032 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 TMEM260Q9NX78 707 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 SEC63Q9UGP8 760 aaKnown RBP14.44□□□□□ -0.1
TRAF4-209ENST00000473421 LRFN2Q9ULH4 789 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 ST3GAL5Q9UNP4 418 aa14.44□□□□□ -0.1
TRAF4-209ENST00000473421 RBM8AQ9Y5S9 174 aaKnown RBP14.44□□□□□ -0.1
TRAF4-209ENST00000473421 SMIM35A0A1B0GVV1 85 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 DDX39AO00148 427 aaKnown RBP14.43□□□□□ -0.1
TRAF4-209ENST00000473421 GFRA3O60609 400 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 ATG7O95352 703 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 SPOUT1Q5T280 376 aaKnown RBP14.43□□□□□ -0.1
TRAF4-209ENST00000473421 PLPP4Q5VZY2 271 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 WWC2Q6AWC2 1192 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 KANK3Q6NY19 840 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 HEATR3Q7Z4Q2 680 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 PPP2R3CQ969Q6 453 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 AGO4Q9HCK5 861 aaKnown RBP14.43□□□□□ -0.1
TRAF4-209ENST00000473421 RGS18Q9NS28 235 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 PCDHB7Q9Y5E2 793 aa14.43□□□□□ -0.1
TRAF4-209ENST00000473421 DCHS1Q96JQ0 3298 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 IGKV6D-21A0A0A0MT36 114 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 SPDYE3A6NKU9 549 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 M0QZ92 97 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 ST18O60284 1047 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 WEE2P0C1S8 567 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 ATF7P17544 494 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-209ENST00000473421 KIF5BP33176 963 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 TECP42680 631 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 PTPN21Q16825 1174 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 KIZQ2M2Z5 673 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 ANKRD54Q6NXT1 300 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 FAM228AQ86W67 206 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 CCDC60Q8IWA6 550 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-209ENST00000473421 THNSL1Q8IYQ7 743 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 AZI2Q9H6S1 392 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 PCDHB12Q9Y5F1 795 aa14.42□□□□□ -0.1
TRAF4-209ENST00000473421 DHX15O43143 795 aaKnown RBP14.41□□□□□ -0.1
TRAF4-209ENST00000473421 RPS6KA5O75582 802 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 VTNP04004 478 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 FAM189BP81408 668 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 DSC3Q14574 896 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 ABHD15Q6UXT9 468 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 TMEM184AQ6ZMB5 413 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 NFXL1Q6ZNB6 911 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 TMTC3Q6ZXV5 915 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 SLC24A5Q71RS6 500 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 TRMT1LQ7Z2T5 733 aaKnown RBP14.41□□□□□ -0.1
TRAF4-209ENST00000473421 ZNF668Q96K58 619 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-209ENST00000473421 CASD1Q96PB1 797 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 NEK1Q96PY6 1258 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 OSMRQ99650 979 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 LZTS2Q9BRK4 669 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 PTPRZ1P23471 2315 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-209ENST00000473421 NFASCO94856 1347 aa14.41□□□□□ -0.1
TRAF4-209ENST00000473421 DENND3A2RUS2 1198 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 MEIS1O00470 390 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 MAFGO15525 162 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 GPR32O75388 356 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 BRD1O95696 1058 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 UBE3AQ05086 875 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 FUT2Q10981 343 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 ASCL5Q7RTU5 278 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 NME8Q8N427 588 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 FANCBQ8NB91 859 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 ATOH1Q92858 354 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-209ENST00000473421 TCF25Q9BQ70 676 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 DMDP11532 3685 aa14.4□□□□□ -0.1
TRAF4-209ENST00000473421 CCDC69A6NI79 296 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 C2CD4DB7Z1M9 353 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 FAM86B1E9PN63 330 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 C22orf31O95567 290 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 FAM86B2P0C5J1 330 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 CEP55Q53EZ4 464 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 SWSAP1Q6NVH7 229 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 C12orf76Q8N812 135 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-209ENST00000473421 TMEM105Q8N8V8 129 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 KREMEN2Q8NCW0 462 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 RUFY2Q8WXA3 655 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 MRPS27Q92552 414 aaKnown RBP14.39□□□□□ -0.11
TRAF4-209ENST00000473421 RIPOR3Q96MK2 946 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 SDF4Q9BRK5 362 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 ANO3Q9BYT9 981 aa14.39□□□□□ -0.11
TRAF4-209ENST00000473421 LSG1Q9H089 658 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms