RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 RUFY4Q6ZNE9 571 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 CABP7Q86V35 215 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
PRKCB-205ENST00000472066 KCNG4Q8TDN1 519 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 PIGOQ8TEQ8 1089 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 WNT8BQ93098 351 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 CEP170P1Q96L14 293 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 CEP89Q96ST8 783 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 SH2D3AQ9BRG2 576 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 NOC4LQ9BVI4 516 aaKnown RBP13.78□□□□□ -0.2
PRKCB-205ENST00000472066 HIPK3Q9H422 1215 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 CYP26B1Q9NR63 512 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 PRKAG2Q9UGJ0 569 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 ZMYND8Q9ULU4 1186 aaPredicted RBP13.78□□□□□ -0.2
PRKCB-205ENST00000472066 PCDHA2Q9Y5H9 948 aa13.78□□□□□ -0.2
PRKCB-205ENST00000472066 MAGEB2O15479 319 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 C22orf31O95567 290 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 TIMP1P01033 207 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 RAG1P15918 1043 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 NCLP19338 710 aaKnown RBP13.77□□□□□ -0.21
PRKCB-205ENST00000472066 ITGB8P26012 769 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 UBA7P41226 1012 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 BFSP2Q13515 415 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 TRIM71Q2Q1W2 868 aaKnown RBP13.77□□□□□ -0.21
PRKCB-205ENST00000472066 SPECC1Q5M775 1068 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 HYIQ5T013 277 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 POTEGQ6S5H5 508 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 CCDC155Q8N6L0 562 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 EPSTI1Q96J88 318 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 PNMA5Q96PV4 448 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 KIAA1024Q9UPX6 916 aa13.77□□□□□ -0.21
PRKCB-205ENST00000472066 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 SMIM35A0A1B0GVV1 85 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 SLC26A4O43511 780 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 CUTAO60888 179 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 MAFO75444 373 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-205ENST00000472066 CKBP12277 381 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 CYP2C18P33260 490 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 RARRES1P49788 294 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 RBL2Q08999 1139 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 TBC1D8BQ0IIM8 1120 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 GRB10Q13322 594 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 ZRSR1Q15695 479 aaKnown RBP13.76□□□□□ -0.21
PRKCB-205ENST00000472066 XKR9Q5GH70 373 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 EFCAB12Q6NXP0 572 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 TAF2Q6P1X5 1199 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 USP49Q70CQ1 688 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 RPAINQ86UA6 219 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 RETREG2Q8NC44 543 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 CAGE1Q8TC20 777 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 LEO1Q8WVC0 666 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-205ENST00000472066 DNAJB3Q8WWF6 145 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 SPATA32Q96LK8 384 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 PPP1R12CQ9BZL4 782 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 CCSER1Q9C0I3 900 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 SCAND2PQ9GZW5 306 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-205ENST00000472066 DDX19AQ9NUU7 478 aaKnown RBP13.76□□□□□ -0.21
PRKCB-205ENST00000472066 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
PRKCB-205ENST00000472066 PCDHA7Q9UN72 937 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 DNM3Q9UQ16 869 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 PPME1Q9Y570 386 aa13.76□□□□□ -0.21
PRKCB-205ENST00000472066 TNRC18O15417 2968 aaPredicted RBP13.76□□□□□ -0.21
PRKCB-205ENST00000472066 KDM3AQ9Y4C1 1321 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 IGKV6-21A0A0C4DH24 114 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 H0YGN5 161 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 THPOP40225 353 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 RFC5P40937 340 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 ME1P48163 572 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 AXDND1Q5T1B0 1012 aaPredicted RBP13.75□□□□□ -0.21
PRKCB-205ENST00000472066 ZNF618Q5T7W0 954 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 KCNK18Q7Z418 384 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 EXOC8Q8IYI6 725 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 KIAA0319LQ8IZA0 1049 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 NME8Q8N427 588 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 KCTD17Q8N5Z5 321 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 METTL13Q8N6R0 699 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 SYMPKQ92797 1274 aaKnown RBP13.75□□□□□ -0.21
PRKCB-205ENST00000472066 CALML4Q96GE6 196 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 CDK5RAP3Q96JB5 506 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 PLIN2Q99541 437 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 NT5C3AQ9H0P0 336 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 PCDH10Q9P2E7 1040 aa13.75□□□□□ -0.21
PRKCB-205ENST00000472066 E9PMD0 336 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 CAND2O75155 1236 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 SELPP16109 830 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 TMOD1P28289 359 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 CCL23P55773 120 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
PRKCB-205ENST00000472066 KARSQ15046 597 aaKnown RBP13.74□□□□□ -0.21
PRKCB-205ENST00000472066 TMEM119Q4V9L6 283 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 FAM26DQ5JW98 314 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 MFSD5Q6N075 450 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 TRAF7Q6Q0C0 670 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 SHC4Q6S5L8 630 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 RSPH3Q86UC2 560 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 LRRC71Q8N4P6 559 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 LINC01465Q8N7H1 131 aa13.74□□□□□ -0.21
PRKCB-205ENST00000472066 SLC7A3Q8WY07 619 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms