RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 TRPV2Q9Y5S1 764 aa10.3□□□□□ -0.76
SYN3-211ENST00000472027 TRIOBPQ9H2D6 2365 aa10.3□□□□□ -0.76
SYN3-211ENST00000472027 TANC1Q9C0D5 1861 aa10.3□□□□□ -0.76
SYN3-211ENST00000472027 KIF28PB7ZC32 967 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 MAGEB2O15479 319 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 NEMFO60524 1076 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 P4HBP07237 508 aaKnown RBP10.29□□□□□ -0.76
SYN3-211ENST00000472027 GJB2P29033 226 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 TXKP42681 527 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 QARSP47897 775 aaKnown RBP10.29□□□□□ -0.76
SYN3-211ENST00000472027 PSMC5P62195 406 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 MKRN4PQ13434 485 aaPredicted RBP10.29□□□□□ -0.76
SYN3-211ENST00000472027 GNL2Q13823 731 aaKnown RBP10.29□□□□□ -0.76
SYN3-211ENST00000472027 LPIN1Q14693 890 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 GRIN2CQ14957 1233 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 CALCRLQ16602 461 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 XKR3Q5GH77 459 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 FBXO47Q5MNV8 452 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 NCAPH2Q6IBW4 605 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 EFCAB12Q6NXP0 572 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 NOSTRINQ8IVI9 506 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 METTL13Q8N6R0 699 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 APBB2Q92870 758 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 MTMR9Q96QG7 549 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 CDX2Q99626 313 aaPredicted RBP10.29□□□□□ -0.76
SYN3-211ENST00000472027 NIFKQ9BYG3 293 aaKnown RBP10.29□□□□□ -0.76
SYN3-211ENST00000472027 TTC12Q9H892 705 aaPredicted RBP10.29□□□□□ -0.76
SYN3-211ENST00000472027 AGO3Q9H9G7 860 aaKnown RBP10.29□□□□□ -0.76
SYN3-211ENST00000472027 SLC28A3Q9HAS3 691 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 KIF3AQ9Y496 699 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.29□□□□□ -0.76
SYN3-211ENST00000472027 SQORQ9Y6N5 450 aa10.29□□□□□ -0.76
SYN3-211ENST00000472027 LAMA3Q16787 3333 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.28□□□□□ -0.76
SYN3-211ENST00000472027 TMEM150BA6NC51 233 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 DDX11L8A8MPP1 907 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 TLL1O43897 1013 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 DKC1O60832 514 aaKnown RBP eCLIP10.28□□□□□ -0.76
SYN3-211ENST00000472027 AMHP03971 560 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 U2AF2P26368 475 aaKnown RBP eCLIP10.28□□□□□ -0.76
SYN3-211ENST00000472027 TMOD1P28289 359 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 MCM7P33993 719 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 SPIRE1Q08AE8 756 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 TARBP2Q15633 366 aaKnown RBP10.28□□□□□ -0.76
SYN3-211ENST00000472027 ZNF174Q15697 407 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 MTERF2Q49AM1 385 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 TSHZ1Q6ZSZ6 1077 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 LRRC71Q8N4P6 559 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 USP38Q8NB14 1042 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 DYDC2Q96IM9 177 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 CEP89Q96ST8 783 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 SH2D3AQ9BRG2 576 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 TMEM60Q9H2L4 133 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 SUGCTQ9HAC7 445 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 CDHR5Q9HBB8 845 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 RGL1Q9NZL6 768 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 SEPT9Q9UHD8 586 aaPredicted RBP10.28□□□□□ -0.76
SYN3-211ENST00000472027 SMC3Q9UQE7 1217 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 GINS2Q9Y248 185 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 STXBP5LQ9Y2K9 1186 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 KDM3AQ9Y4C1 1321 aa10.28□□□□□ -0.76
SYN3-211ENST00000472027 SZT2Q5T011 3432 aa10.27□□□□□ -0.76
SYN3-211ENST00000472027 ENPP3O14638 875 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 SLITRK3O94933 977 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 GJB5O95377 273 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 VTNP04004 478 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 CA3P07451 260 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 CD52P31358 61 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 CLCN3P51790 818 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 TBC1D8BQ0IIM8 1120 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 CTTNQ14247 550 aaKnown RBP10.27□□□□□ -0.77
SYN3-211ENST00000472027 TTC38Q5R3I4 469 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 PPP2R2DQ66LE6 453 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 FAM117BQ6P1L5 589 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 ANO5Q75V66 913 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 TPH2Q8IWU9 490 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 C4orf19Q8IY42 314 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 MYOCDQ8IZQ8 938 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 LINC01465Q8N7H1 131 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 MYLIPQ8WY64 445 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 TOP1MTQ969P6 601 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 PPP1R16BQ96T49 567 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 RAD9AQ99638 391 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 EIF2AK1Q9BQI3 630 aaKnown RBP10.27□□□□□ -0.77
SYN3-211ENST00000472027 WRAP73Q9P2S5 460 aaPredicted RBP10.27□□□□□ -0.77
SYN3-211ENST00000472027 PADI3Q9ULW8 664 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 NOL7Q9UMY1 257 aaKnown RBP10.27□□□□□ -0.77
SYN3-211ENST00000472027 TET1Q8NFU7 2136 aa10.27□□□□□ -0.77
SYN3-211ENST00000472027 KAT6AQ92794 2004 aa10.26□□□□□ -0.77
SYN3-211ENST00000472027 IGKV6-21A0A0C4DH24 114 aa10.26□□□□□ -0.77
SYN3-211ENST00000472027 H3BQV1 296 aa10.26□□□□□ -0.77
SYN3-211ENST00000472027 GPR32O75388 356 aa10.26□□□□□ -0.77
SYN3-211ENST00000472027 RPS6KA5O75582 802 aa10.26□□□□□ -0.77
SYN3-211ENST00000472027 ARHGEF15O94989 841 aa10.26□□□□□ -0.77
SYN3-211ENST00000472027 UPP2O95045 317 aa10.26□□□□□ -0.77
SYN3-211ENST00000472027 TECP42680 631 aa10.26□□□□□ -0.77
SYN3-211ENST00000472027 TRAPPC10P48553 1259 aa10.26□□□□□ -0.77
SYN3-211ENST00000472027 TOB1P50616 345 aaPredicted RBP10.26□□□□□ -0.77
SYN3-211ENST00000472027 CRYBB1P53674 252 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms