RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 COPB1P53618 953 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 FSCBQ5H9T9 825 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 EIF3CQ99613 913 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PDE11AQ9HCR9 933 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PAPOLBQ9NRJ5 636 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SUN2Q9UH99 717 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 URB1O60287 2271 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ZMYM3Q14202 1370 aa14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GTPBP6O43824 516 aaPredicted RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CHCHD3Q9NX63 227 aaKnown RBP14.18□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 FOSP01100 380 aaPredicted RBP14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 KPNA2P52292 529 aaKnown RBP14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TTC23LQ6PF05 361 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ATXN7L3BQ96GX2 97 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PUS3Q9BZE2 481 aaKnown RBP14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SENP1Q9P0U3 644 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PMS1P54277 932 aaKnown RBP14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 RNF207Q6ZRF8 634 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ERICH1Q86X53 443 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 A2MP01023 1474 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ARIH2O95376 493 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TTC17Q96AE7 1141 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CDHR1Q96JP9 859 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ZHX2Q9Y6X8 837 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 RRM2BQ7LG56 351 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 RHPN2Q8IUC4 686 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GLYCTKQ8IVS8 523 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TRIML2Q8N7C3 387 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 AGR3Q8TD06 166 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ZBTB18Q99592 522 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ECEL1O95672 775 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 KLHL29Q96CT2 875 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PRR23AA6NEV1 266 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 EIF4E1BA6NMX2 242 aaKnown RBP14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PIK3R2O00459 728 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 NBNO60934 754 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CARD14Q9BXL6 1004 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MKL2Q9ULH7 1088 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 L3MBTL1Q9Y468 752 aa14.17□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 KRT8P05787 483 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TSPY1Q01534 308 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DONSONQ9NYP3 566 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 WARS2Q9UGM6 360 aaKnown RBP14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 UHRF1BP1Q6BDS2 1440 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ARHGEF9O43307 516 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ADCK2Q7Z695 626 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SLC35F6Q8N357 371 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ING2Q9H160 280 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 IQANK1A0A1B0GTG1 560 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ERVV-2B6SEH9 535 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CTNND1O60716 968 aaKnown RBP14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 HSPA4LO95757 839 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 AP1B1Q10567 949 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DHX38Q92620 1227 aaKnown RBP14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SPZ1Q9BXG8 430 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 UPF3AQ9H1J1 476 aaKnown RBP14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TRIM45Q9H8W5 580 aaPredicted RBP14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PI4KBQ9UBF8 816 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CCDC195A0A1B0GUA6 201 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GNAT1P11488 350 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MXI1P50539 228 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ARMC2Q8NEN0 867 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 VPS39Q96JC1 886 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SEMA3EO15041 775 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 LRRC74AQ0VAA2 488 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CCDC197Q8NCU1 140 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CCDC17Q96LX7 622 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SMAD5Q99717 465 aaKnown RBP14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 WDR11Q9BZH6 1224 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TTC7AQ9ULT0 858 aaPredicted RBP14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ERBB3P21860 1342 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CLDN3O15551 220 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TMCC1O94876 653 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CPB1P15086 417 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 LRRC31Q6UY01 552 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 GIPC2Q8TF65 315 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 RUNDC3BQ96NL0 473 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CACNA2D2Q9NY47 1150 aa14.16□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 MARCH10Q8NA82 808 aaPredicted RBP14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 OR6P1Q8NGX9 317 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 RAET1EQ8TD07 263 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ZNF274Q96GC6 653 aaPredicted RBP14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SCRN1Q12765 414 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TAF1BQ53T94 588 aaPredicted RBP14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 AARS2Q5JTZ9 985 aaKnown RBP14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SPATA1Q5VX52 437 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TAS2R42Q7RTR8 314 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 TRIM42Q8IWZ5 723 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CCDC51Q96ER9 411 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 LBHD1Q9BQE6 289 aaPredicted RBP14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 KANSL2Q9H9L4 492 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 ZNF212Q9UDV6 495 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 DNMBPQ6XZF7 1577 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 PSMC5P62195 406 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 SNCBQ16143 134 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 RBBP7Q16576 425 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 CATSPER3Q86XQ3 398 aa14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 THOC2Q8NI27 1593 aaKnown RBP14.15□□□□□ -0.14
NPHP3-ACAD11-201ENST00000471702 IQCDQ96DY2 449 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms