RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 ZNF408Q9H9D4 720 aa13.95□□□□□ -0.18
PCCB-210ENST00000471595 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 LRRD1A4D1F6 860 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 POTECB2RU33 542 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 FAM133BQ5BKY9 247 aaKnown RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 POTEBQ6S5H4 581 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 RNF207Q6ZRF8 634 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 SLC44A5Q8NCS7 719 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 PIGOQ8TEQ8 1089 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 TAF1DQ9H5J8 278 aaPredicted RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 SFI1A8K8P3 1242 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 SH3BP5O60239 455 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 TJP3O95049 919 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 ATP1A1P05023 1023 aaKnown RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 PEX3P56589 373 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 SESN3P58005 492 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 TFAMQ00059 246 aaKnown RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 FMR1Q06787 632 aaKnown RBP eCLIP13.94□□□□□ -0.184e-13■■■■■ 26.9
PCCB-210ENST00000471595 MTERF2Q49AM1 385 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 SBK1Q52WX2 424 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 C12orf60Q5U649 245 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 DARS2Q6PI48 645 aaKnown RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 ADSSL1Q8N142 457 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 MASTLQ96GX5 879 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 GPR101Q96P66 508 aaPredicted RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 VIPAS39Q9H9C1 493 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 USP17L10C9JJH3 530 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 SLC26A4O43511 780 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 RFX5P48382 616 aaPredicted RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 NR1H3Q13133 447 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 TBC1D10BQ4KMP7 808 aaPredicted RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 FRMD5Q7Z6J6 570 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 HDAC6Q9UBN7 1215 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 FAM187AA6NFU0 413 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 GH2P01242 217 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 ADRA2BP18089 450 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 RBM41Q96IZ5 413 aaKnown RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 CPVLQ9H3G5 476 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 VCX3AQ9NNX9 186 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 TBK1Q9UHD2 729 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 IPO11Q9UI26 975 aaKnown RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 PIK3C2BO00750 1634 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 PALM3A6NDB9 673 aaPredicted RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 ANTXR2P58335 489 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 BASP1P80723 227 aaKnown RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 MTF1Q14872 753 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 CEP120Q8N960 986 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCCB-210ENST00000471595 IL25Q9H293 177 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 TBC1D22BQ9NU19 505 aa13.94□□□□□ -0.18
PCCB-210ENST00000471595 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
PCCB-210ENST00000471595 USP17L15C9J2P7 530 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 USP17L13C9JLJ4 530 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 USP17L11C9JVI0 530 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 USP17L18D6R9N7 530 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 USP17L22D6RA61 530 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 USP17L17D6RBQ6 530 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 USP17L19D6RCP7 530 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 USP17L20D6RJB6 530 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 MMEP08473 750 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 SRGAP2BP0DMP2 458 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 SRGNP10124 158 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 USP17L24Q0WX57 530 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 PPP2R5CQ13362 524 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 ANKRD40Q6AI12 368 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 USP17L6PQ6QN14 398 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 MCPH1Q8NEM0 835 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 TRIM9Q9C026 710 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 SNX24Q9Y343 169 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 IQANK1A0A1B0GTG1 560 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 GOLGA8IPA6NC78 632 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 GOLGA8JA6NMD2 632 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 ASNSP08243 561 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 FDPSP14324 419 aaKnown RBP13.93□□□□□ -0.18
PCCB-210ENST00000471595 ANXA13P27216 316 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 CHRNA3P32297 505 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 ASPHQ12797 758 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 TRIP13Q15645 432 aaPredicted RBP13.93□□□□□ -0.18
PCCB-210ENST00000471595 DBN1Q16643 649 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 SCYL3Q8IZE3 742 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 SPC25Q9HBM1 224 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 CNOT8Q9UFF9 292 aaKnown RBP13.93□□□□□ -0.18
PCCB-210ENST00000471595 AFG3L2Q9Y4W6 797 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 CLTCQ00610 1675 aaKnown RBP13.93□□□□□ -0.18
PCCB-210ENST00000471595 PFDN6O15212 129 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 CTIFO43310 598 aaKnown RBP13.93□□□□□ -0.18
PCCB-210ENST00000471595 RHOBTB3O94955 611 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 CTDNEP1O95476 244 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 GRM1Q13255 1194 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 CCDC93Q567U6 631 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 PADI6Q6TGC4 694 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 ADGRF4Q8IZF3 695 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 NSUN4Q96CB9 384 aaKnown RBP13.93□□□□□ -0.18
PCCB-210ENST00000471595 C7orf25Q9BPX7 421 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 MSTO1Q9BUK6 570 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 FEM1BQ9UK73 627 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 PFASO15067 1338 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 MAPK13O15264 365 aa13.93□□□□□ -0.18
PCCB-210ENST00000471595 OPHN1O60890 802 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms