RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	AGXT2	Q9BYV1	514 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	CLSTN2	Q9H4D0	955 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	PHAX	Q9H814	394 aa	Known RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	TTC12	Q9H892	705 aa	Predicted RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	OGFR	Q9NZT2	677 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	DBF4	Q9UBU7	674 aa	Predicted RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	RCOR1	Q9UKL0	485 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	TPCN1	Q9ULQ1	816 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	PYCARD	Q9ULZ3	195 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	ALS2	Q96Q42	1657 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	C4A	P0C0L4	1744 aa		4.21	□□□□□ -1.73
CSMD2-208	ENST00000471438	C4B	P0C0L5	1744 aa		4.21	□□□□□ -1.73
CSMD2-208	ENST00000471438	UNC80	Q8N2C7	3258 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	PI4KAP2	A4QPH2	592 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	SLC27A2	O14975	620 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	C6	P13671	934 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	ATP5J	P18859	108 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	VIPR1	P32241	457 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	ZNF75D	P51815	510 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	GABPB1	Q06547	395 aa	Predicted RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	REST	Q13127	1097 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	PWP1	Q13610	501 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	ATP2B3	Q16720	1220 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	LARP1B	Q659C4	914 aa	Known RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	NAA16	Q6N069	864 aa	Predicted RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	GIMAP6	Q6P9H5	292 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	CWC27	Q6UX04	472 aa	Known RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	FERMT3	Q86UX7	667 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	CREBRF	Q8IUR6	639 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	PI4KAP1	Q8N8J0	262 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	ANKS4B	Q8N8V4	417 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	ENGASE	Q8NFI3	743 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	LINS1	Q8NG48	757 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	MZB1	Q8WU39	189 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	CYB5D2	Q8WUJ1	264 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	LEO1	Q8WVC0	666 aa	Predicted RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	ACSF2	Q96CM8	615 aa	Predicted RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	VWCE	Q96DN2	955 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	FAM161B	Q96MY7	647 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	JAKMIP1	Q96N16	626 aa	Known RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	ZNF830	Q96NB3	372 aa	Predicted RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	NUP62CL	Q9H1M0	184 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	DUSP15	Q9H1R2	295 aa	Predicted RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	IL1RAPL2	Q9NP60	686 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	COPRS	Q9NQ92	184 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	CFAP45	Q9UL16	551 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	TLR6	Q9Y2C9	796 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	RBM8A	Q9Y5S9	174 aa	Known RBP	4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	KIF1A	Q12756	1690 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	ECM29	Q5VYK3	1845 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	TJP1	Q07157	1748 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	PNPLA7	Q6ZV29	1317 aa		4.21	□□□□□ -1.74
CSMD2-208	ENST00000471438	FAM221A	A4D161	298 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	C1QTNF3-AMACR	E9PGA6	284 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	KIF2A	O00139	706 aa	Predicted RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	CYR61	O00622	381 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	RNMT	O43148	476 aa	Known RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	PFKFB2	O60825	505 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	TAF5L	O75529	589 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	HMGB1	P09429	215 aa	Known RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	RFX5	P48382	616 aa	Predicted RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	CDR1	P51861	262 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	EXOSC10	Q01780	885 aa	Known RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	CHAF1A	Q13111	956 aa	Predicted RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	DUSP4	Q13115	394 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	RABL6	Q3YEC7	729 aa	Predicted RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	TAF3	Q5VWG9	929 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	CPZ	Q66K79	652 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	OLFML2B	Q68BL8	750 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	ZSCAN25	Q6NSZ9	544 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	BLOC1S2	Q6QNY1	142 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	CCDC83	Q8IWF9	413 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	ZFPM1	Q8IX07	1006 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	KCNH5	Q8NCM2	988 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	DNAJB8	Q8NHS0	232 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	GTF3C6	Q969F1	213 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	EAF2	Q96CJ1	260 aa	Predicted RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	PGBD1	Q96JS3	809 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	RHOV	Q96L33	236 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	GPR62	Q9BZJ7	368 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	GPR108	Q9NPR9	543 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	USP40	Q9NVE5	1235 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	CHPF2	Q9P2E5	772 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	IMPACT	Q9P2X3	320 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	CTNNA3	Q9UI47	895 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	DDX41	Q9UJV9	622 aa	Known RBP	4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	AKAP11	Q9UKA4	1901 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	BAHCC1	Q9P281	2608 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	SALL1	Q9NSC2	1324 aa		4.2	□□□□□ -1.74
CSMD2-208	ENST00000471438	PALLD	Q8WX93	1383 aa		4.19	□□□□□ -1.74
CSMD2-208	ENST00000471438	FAM237A	A0A1B0GTK4	181 aa		4.19	□□□□□ -1.74
CSMD2-208	ENST00000471438		A0A1W2PQ27	194 aa		4.19	□□□□□ -1.74
CSMD2-208	ENST00000471438		A0A1W2PQ64	194 aa		4.19	□□□□□ -1.74
CSMD2-208	ENST00000471438		A0A1W2PQD8	194 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms