RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 M0R082 166 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 LAD1O00515 517 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 TREHO43280 583 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 KINO60870 393 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 CPNE3O75131 537 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 ALBP02768 609 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 EIF2AK2P19525 551 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 ATP2B1P20020 1258 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 MARCKSP29966 332 aaPredicted RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 DEKP35659 375 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 SYKP43405 635 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 SNW1Q13573 536 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 ZNF174Q15697 407 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 MAP3K11Q16584 847 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 QRICH1Q2TAL8 776 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 EARS2Q5JPH6 523 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 RESP18Q5W5W9 173 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 RBM43Q6ZSC3 357 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 C8orf86Q6ZUL3 223 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 FMR1NBQ8N0W7 255 aaPredicted RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 REXO1Q8N1G1 1221 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 CEP120Q8N960 986 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 ZNF417Q8TAU3 575 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 CUL5Q93034 780 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 COA7Q96BR5 231 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 CCDC34Q96HJ3 373 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 ZNF587Q96SQ5 575 aaPredicted RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 FEZ1Q99689 392 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 NAP1L4Q99733 375 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 PYM1Q9BRP8 204 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 DNAJC25Q9H1X3 360 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 TSPY26PQ9H489 355 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 GOLPH3LQ9H4A5 285 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 PSTPIP2Q9H939 334 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 FBXO2Q9UK22 296 aaPredicted RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 NAGPAQ9UK23 515 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 SCAF8Q9UPN6 1271 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 PCDHA1Q9Y5I3 950 aa6.9□□□□□ -1.3
SMNDC1-204ENST00000471297 MYH15Q9Y2K3 1946 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 A0A1B0GVL5 298 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 ANKRD33BA6NCL7 494 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 EIF1AYO14602 144 aaKnown RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 PPP1R11O60927 126 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 ZNF202O95125 648 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 FOSP01100 380 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 CCDC192P0DO97 292 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 PFKFB1P16118 471 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 HOXB4P17483 251 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 PTPRAP18433 802 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 EPHX2P34913 555 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 NF2P35240 595 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 PRPHP41219 470 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 NDUFA8P51970 172 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 SNRPNP63162 240 aaKnown RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 ATP2C1P98194 919 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 AP3B2Q13367 1082 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 INF2Q27J81 1249 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 FAM83BQ5T0W9 1011 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 SHC4Q6S5L8 630 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 SASS6Q6UVJ0 657 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 NEK8Q86SG6 692 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 PNMA8AQ86V59 439 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 GAS2L3Q86XJ1 694 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 SPICE1Q8N0Z3 855 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 SAMD3Q8N6K7 520 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 BEND7Q8N7W2 519 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 PLD4Q96BZ4 506 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 WRNIP1Q96S55 665 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 NUP88Q99567 741 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 SDF4Q9BRK5 362 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 SMG9Q9H0W8 520 aaKnown RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 RANBP17Q9H2T7 1088 aaKnown RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 JPH1Q9HDC5 661 aaPredicted RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 FRRS1LQ9P0K9 344 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 USP25Q9UHP3 1055 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 HOOK1Q9UJC3 728 aaKnown RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 HPSEQ9Y251 543 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 MRPL11Q9Y3B7 192 aaKnown RBP6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 SBF1O95248 1867 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 MYH6P13533 1939 aa6.89□□□□□ -1.31
SMNDC1-204ENST00000471297 MYH4Q9Y623 1939 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 ABCB11O95342 1321 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 LILRB5O75023 590 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 USP2O75604 605 aaPredicted RBP6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 CAVIN2O95810 425 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 GCFC2P16383 781 aaKnown RBP6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 MCM7P33993 719 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 LONP1P36776 959 aaKnown RBP6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 IREB2P48200 963 aaKnown RBP6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 USP11P51784 963 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 BACE1P56817 501 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 ZYXQ15942 572 aaKnown RBP6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 CAMK4Q16566 473 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 UVSSAQ2YD98 709 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 KIAA1755Q5JYT7 1200 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 PRAMEF18Q5VWM3 479 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 JAKMIP3Q5VZ66 844 aa6.88□□□□□ -1.31
SMNDC1-204ENST00000471297 DNAJC14Q6Y2X3 702 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms