RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 TCRBV16S1A1N1A0A5B0 115 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 SCDO00767 359 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 GPR42O15529 346 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 NARSO43776 548 aaKnown RBP2.21□□□□□ -2.06
UBXN4-207ENST00000471246 B4GALT4O60513 344 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 CLASP2O75122 1294 aaKnown RBP2.21□□□□□ -2.06
UBXN4-207ENST00000471246 ZNF202O95125 648 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 MPIG6BO95866 241 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 APPP05067 770 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 MMEP08473 750 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 ZNF888P0CJ79 500 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-207ENST00000471246 FBLP22087 321 aaKnown RBP2.21□□□□□ -2.06
UBXN4-207ENST00000471246 PTGS1P23219 599 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 POLD1P28340 1107 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 ETV4P43268 484 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 HERVK_113P62684 666 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 PPP2CBP62714 309 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 PPP2CAP67775 309 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 IL13RA1P78552 427 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 LACTBP83111 547 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-207ENST00000471246 SEC23AQ15436 765 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 NFE2L2Q16236 605 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 TMEM177Q53S58 311 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 MIIPQ5JXC2 388 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 SLFN13Q68D06 897 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 CIR1Q86X95 450 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-207ENST00000471246 IFNL2Q8IZJ0 200 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 LILRB2Q8N423 598 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 AJUBAQ96IF1 538 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 MAGEB10Q96LZ2 347 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-207ENST00000471246 AGAP2Q99490 1192 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 PTPN18Q99952 460 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 KATNBL1Q9H079 304 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 TRIM39Q9HCM9 518 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 JADE2Q9NQC1 790 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 INCENPQ9NQS7 918 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 BTBD7Q9P203 1132 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 CDK11AQ9UQ88 783 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-207ENST00000471246 PTPN22Q9Y2R2 807 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 ZDHHC9Q9Y397 364 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 SLC4A7Q9Y6M7 1214 aa2.21□□□□□ -2.06
UBXN4-207ENST00000471246 CCDC163A0A0D9SF12 145 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 SLC12A8A0AV02 714 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 ESYT3A0FGR9 886 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 NPEPPSL1A6NEC2 478 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 RASSF10A6NK89 507 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 PLD2O14939 933 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 MUSKO15146 869 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 KCNQ2O43526 872 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 CUTAO60888 179 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 HIP1RO75146 1068 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 RAPGEF3O95398 923 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 HMGCRP04035 888 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 ADCY8P40145 1251 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 SELENOPP49908 381 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 RRADP55042 308 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 IRF9Q00978 393 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 TOP3AQ13472 1001 aaPredicted RBP2.2□□□□□ -2.06
UBXN4-207ENST00000471246 SQSTM1Q13501 440 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 USP10Q14694 798 aaKnown RBP2.2□□□□□ -2.06
UBXN4-207ENST00000471246 WDR72Q3MJ13 1102 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 ZNF568Q3ZCX4 644 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 ABHD17CQ6PCB6 329 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 LRSAM1Q6UWE0 723 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 DPP8Q6V1X1 898 aaPredicted RBP2.2□□□□□ -2.06
UBXN4-207ENST00000471246 OVCH1Q7RTY7 1134 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 IGSF22Q8N9C0 903 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 ASB15Q8WXK1 588 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 ZNF503Q96F45 646 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 LRRC37BQ96QE4 947 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 BRIP1Q9BX63 1249 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 KIAA1683Q9H0B3 1180 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 DEF6Q9H4E7 631 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 KCNH7Q9NS40 1196 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 UCKL1Q9NWZ5 548 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 GALNT8Q9NY28 637 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 TESMINQ9Y4I5 508 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 B3GALT1Q9Y5Z6 326 aa2.2□□□□□ -2.06
UBXN4-207ENST00000471246 PATE3B3GLJ2 98 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 M0R2C6 588 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 FOXP2O15409 715 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 DNAJC8O75937 253 aaPredicted RBP2.19□□□□□ -2.06
UBXN4-207ENST00000471246 GLRX3O76003 335 aaKnown RBP2.19□□□□□ -2.06
UBXN4-207ENST00000471246 KRT37O76014 449 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 NPTXRO95502 500 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 KCNA6P17658 529 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 SDHAP31040 664 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 IGFALSP35858 605 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 MECP2P51608 486 aaKnown RBP2.19□□□□□ -2.06
UBXN4-207ENST00000471246 KCNQ1P51787 676 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 ZNF460Q14592 562 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 TMEM132BQ14DG7 1078 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 STILQ15468 1287 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 RNF151Q2KHN1 245 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 CATSPEREQ5SY80 951 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 KANK2Q63ZY3 851 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 ZCCHC8Q6NZY4 707 aaKnown RBP2.19□□□□□ -2.06
UBXN4-207ENST00000471246 OTOP2Q7RTS6 562 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 LDLRAD3Q86YD5 345 aa2.19□□□□□ -2.06
UBXN4-207ENST00000471246 C2orf69Q8N8R5 385 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms