RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ETV4P43268 484 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 USP10Q14694 798 aaKnown RBP7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 SURF1Q15526 300 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 WDR72Q3MJ13 1102 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 PIK3R6Q5UE93 754 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 SLFN13Q68D06 897 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 CDCA2Q69YH5 1023 aaPredicted RBP7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 DPP8Q6V1X1 898 aaPredicted RBP7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 CXXC5Q7LFL8 322 aaKnown RBP7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 PLEKHH3Q7Z736 793 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 CARD11Q9BXL7 1154 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 KIAA1683Q9H0B3 1180 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 OR10A5Q9H207 317 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 MRPL42Q9Y6G3 142 aaKnown RBP7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 JMJD7P0C870 316 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 ZNF20P17024 532 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 PTX3P26022 381 aaPredicted RBP7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 ERICH6BQ5W0A0 696 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 TMEM200BQ69YZ2 307 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 GLB1LQ6UWU2 654 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 DDX53Q86TM3 631 aaKnown RBP7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 TTC9BQ8N6N2 239 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 CFHR4Q92496 578 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 LOXL4Q96JB6 756 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 C16orf92Q96LL3 132 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 FANCLQ9NW38 375 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 B4GALT6Q9UBX8 382 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 JAG2Q9Y219 1238 aa7.43□□□□□ -1.22
PRPF40A-206ENST00000471167 NPEPPSL1A6NEC2 478 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 FOXS1O43638 330 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 CUTAO60888 179 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 KCNQ1P51787 676 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 RRADP55042 308 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 DUSP8Q13202 625 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 MOGSQ13724 837 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 TCTN3Q6NUS6 607 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 ERCC4Q92889 916 aaPredicted RBP7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 ORAI3Q9BRQ5 295 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 SEC61A2Q9H9S3 476 aa7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 H2AFY2Q9P0M6 372 aaPredicted RBP7.42□□□□□ -1.22
PRPF40A-206ENST00000471167 B4E1Z4 1266 aa7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 KIF11P52732 1056 aa7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 ANTXR2P58335 489 aa7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 ALDH6A1Q02252 535 aaKnown RBP7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 R3HDM1Q15032 1099 aaKnown RBP7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 ARHGAP44Q17R89 818 aa7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 ESRP1Q6NXG1 681 aaKnown RBP7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 HIPK4Q8NE63 616 aa7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 Q8TCH9 128 aa7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 NEIL1Q96FI4 390 aaPredicted RBP7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 TTBK1Q5TCY1 1321 aaPredicted RBP7.41□□□□□ -1.22
PRPF40A-206ENST00000471167 ATP2A2P16615 1042 aaKnown RBP7.4□□□□□ -1.22
PRPF40A-206ENST00000471167 RGS3P49796 1198 aa7.4□□□□□ -1.22
PRPF40A-206ENST00000471167 C16orf86Q6ZW13 317 aa7.4□□□□□ -1.22
PRPF40A-206ENST00000471167 MAGEC2Q9UBF1 373 aaPredicted RBP7.4□□□□□ -1.22
PRPF40A-206ENST00000471167 MAFO75444 373 aaPredicted RBP7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 PRLP01236 227 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 INSRRP14616 1297 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 POU3F2P20265 443 aaPredicted RBP7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 NFYCQ13952 458 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 PCOLCEQ15113 449 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 PCBP1Q15365 356 aaKnown RBP eCLIP7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 TCEA2Q15560 299 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 DALRD3Q5D0E6 543 aaKnown RBP7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 CIR1Q86X95 450 aaPredicted RBP7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 HOMER1Q86YM7 354 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 NXPE1Q8N323 547 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 KIAA1958Q8N8K9 716 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 LRRC37BQ96QE4 947 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 LMF1Q96S06 567 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 ELF4Q99607 663 aaPredicted RBP7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 FOXB1Q99853 325 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 INTS7Q9NVH2 962 aaKnown RBP7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
PRPF40A-206ENST00000471167 A0A0G2JNJ9 132 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 ZNF891A8MT65 544 aaPredicted RBP7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 C1QTNF3-AMACRE9PGA6 284 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 HIP1RO75146 1068 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 HMGCRP04035 888 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 SLC9A1P19634 815 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 FNTBP49356 437 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 STAT5BP51692 787 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 DSG1Q02413 1049 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 HGFACQ04756 655 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 CFAP100Q494V2 611 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 TAX1BP1Q86VP1 789 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 DHX37Q8IY37 1157 aaKnown RBP7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 SYNPOQ8N3V7 929 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 NINJ1Q92982 152 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 JADE2Q9NQC1 790 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 OXSMQ9NWU1 459 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 Q9UFV3 132 aa7.38□□□□□ -1.23
PRPF40A-206ENST00000471167 SEPT7Q16181 437 aaKnown RBP7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 AGBL4Q5VU57 503 aa7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 GRAMD4Q6IC98 578 aa7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 Q6ZSN1 163 aa7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 FILIP1Q7Z7B0 1213 aa7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 KIAA0907Q7Z7F0 614 aaPredicted RBP7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 LRRTM3Q86VH5 581 aa7.37□□□□□ -1.23
PRPF40A-206ENST00000471167 APPBP2Q92624 585 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms