RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 SEPT14Q6ZU15 432 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 SIRT2Q8IXJ6 389 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 SLC44A3Q8N4M1 653 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 STAG1Q8WVM7 1258 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 LINC01599Q8WXQ3 324 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 FAM126AQ9BYI3 521 aaPredicted RBP6.88□□□□□ -1.31
VARS-222ENST00000470953 BOLA2Q9H3K6 86 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 ATP8A2Q9NTI2 1148 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 MTMR4Q9NYA4 1195 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 HCSTQ9UBK5 93 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 HCFC2Q9Y5Z7 792 aa6.88□□□□□ -1.31
VARS-222ENST00000470953 ZFHX3Q15911 3703 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 KANSL1LA0AUZ9 987 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 HRO43593 1189 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 MAFO75444 373 aaPredicted RBP6.87□□□□□ -1.31
VARS-222ENST00000470953 PRDM1O75626 825 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 CHRNA1P02708 482 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 ICAM1P05362 532 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 FDX1P10109 184 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 GHRP10912 638 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 POU3F2P20265 443 aaPredicted RBP6.87□□□□□ -1.31
VARS-222ENST00000470953 HOXC8P31273 242 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 SLC1A4P43007 532 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 RPS6P62753 249 aaKnown RBP6.87□□□□□ -1.31
VARS-222ENST00000470953 UBXN2BQ14CS0 331 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 RNF43Q68DV7 783 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 OTOP3Q7RTS5 596 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 RTN4RL1Q86UN2 441 aaPredicted RBP6.87□□□□□ -1.31
VARS-222ENST00000470953 FAM160B2Q86V87 743 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 FAM160A2Q8N612 972 aaPredicted RBP6.87□□□□□ -1.31
VARS-222ENST00000470953 FAM181AQ8N9Y4 354 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 CHURC1Q8WUH1 139 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 ATP6V0A1Q93050 837 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 ARRDC1-AS1Q9H2J1 176 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 ECHDC1Q9NTX5 307 aa6.87□□□□□ -1.31
VARS-222ENST00000470953 LOC102724159A0A0B4J2E5 919 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 C17orf102A2RUQ5 167 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 FAM170BA6NMN3 283 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 C4orf47A7E2U8 309 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 AXIN1O15169 862 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 N4BP1O75113 896 aaKnown RBP6.86□□□□□ -1.31
VARS-222ENST00000470953 TTLL1O95922 423 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 ZNF806P0C7X5 589 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 ATP5JP18859 108 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 SLC16A2P36021 539 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 CFHR1Q03591 330 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 UBE3AQ05086 875 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 LPIN1Q14693 890 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 PWP2Q15269 919 aaKnown RBP6.86□□□□□ -1.31
VARS-222ENST00000470953 PTPN14Q15678 1187 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 TSHZ3Q63HK5 1081 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 TTBK2Q6IQ55 1244 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 RUFY4Q6ZNE9 571 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 RNF207Q6ZRF8 634 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 CCDC149Q6ZUS6 474 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 CMTR2Q8IYT2 770 aaKnown RBP6.86□□□□□ -1.31
VARS-222ENST00000470953 MDM1Q8TC05 714 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 TBC1D5Q92609 795 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 APBB2Q92870 758 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 GMCL1Q96IK5 515 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 C16orf70Q9BSU1 422 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 KATNAL1Q9BW62 490 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 RNPEPQ9H4A4 650 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 MKNK2Q9HBH9 465 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 DDX41Q9UJV9 622 aaKnown RBP6.86□□□□□ -1.31
VARS-222ENST00000470953 SLC4A4Q9Y6R1 1079 aa6.86□□□□□ -1.31
VARS-222ENST00000470953 COL5A1P20908 1838 aaPredicted RBP6.85□□□□□ -1.31
VARS-222ENST00000470953 FAM221BA6H8Z2 402 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 FGF18O76093 207 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 SMIM10L2AP0DMW4 78 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 SMIM10L2BP0DMW5 78 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 CEACAM1P13688 526 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 MX1P20591 662 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 CD72P21854 359 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 ADD2P35612 726 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 MTAPQ13126 283 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 SNW1Q13573 536 aaKnown RBP6.85□□□□□ -1.31
VARS-222ENST00000470953 HSDL1Q3SXM5 330 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 FAM26DQ5JW98 314 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 ANKRD45Q5TZF3 282 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 TCEAL6Q6IPX3 200 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 RCSD1Q6JBY9 416 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 ST13P5Q8NFI4 369 aaPredicted RBP6.85□□□□□ -1.31
VARS-222ENST00000470953 PPTC7Q8NI37 304 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 TCEAL3Q969E4 200 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 EMID1Q96A84 441 aaPredicted RBP6.85□□□□□ -1.31
VARS-222ENST00000470953 GPR20Q99678 358 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 TCF25Q9BQ70 676 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 DDX23Q9BUQ8 820 aaKnown RBP6.85□□□□□ -1.31
VARS-222ENST00000470953 RANBP17Q9H2T7 1088 aaKnown RBP6.85□□□□□ -1.31
VARS-222ENST00000470953 CCDC86Q9H6F5 360 aaKnown RBP6.85□□□□□ -1.31
VARS-222ENST00000470953 BCAS3Q9H6U6 928 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 DCTPP1Q9H773 170 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 EHMT1Q9H9B1 1298 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 AGO3Q9H9G7 860 aaKnown RBP6.85□□□□□ -1.31
VARS-222ENST00000470953 JADE2Q9NQC1 790 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 SETD4Q9NVD3 440 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 TMEM260Q9NX78 707 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 COL20A1Q9P218 1284 aa6.85□□□□□ -1.31
VARS-222ENST00000470953 C2orf16Q68DN1 1984 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms