RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 OATP04181 439 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 PRKCEQ02156 737 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 SAFBQ15424 915 aaKnown RBP eCLIP17.68■□□□□ 0.42
HDAC6-218ENST00000470942 UGCGQ16739 394 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 METTL13Q8N6R0 699 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 FAM184AQ8NB25 1140 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 MAFAQ8NHW3 353 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-218ENST00000470942 TNFRSF25Q93038 417 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 C8orf76Q96K31 380 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 FAM20AQ96MK3 541 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 RAD9AQ99638 391 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 CELF4Q9BZC1 486 aaKnown RBP17.68■□□□□ 0.42
HDAC6-218ENST00000470942 UPP2O95045 317 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 BAG4O95429 457 aaKnown RBP17.67■□□□□ 0.42
HDAC6-218ENST00000470942 C22orf31O95567 290 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 CD52P31358 61 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 HMGN5P82970 282 aaKnown RBP17.67■□□□□ 0.42
HDAC6-218ENST00000470942 B3GNT9Q6UX72 402 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 TSHZ1Q6ZSZ6 1077 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 KIAA0319LQ8IZA0 1049 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 SLC17A8Q8NDX2 589 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 KCNMB3Q9NPA1 279 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 GINS2Q9Y248 185 aa17.67■□□□□ 0.42
HDAC6-218ENST00000470942 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-218ENST00000470942 LCHNA4D1U4 455 aa17.66■□□□□ 0.42
HDAC6-218ENST00000470942 TBX3O15119 743 aa17.66■□□□□ 0.42
HDAC6-218ENST00000470942 MAGEB2O15479 319 aa17.66■□□□□ 0.42
HDAC6-218ENST00000470942 ARHGEF15O94989 841 aa17.66■□□□□ 0.42
HDAC6-218ENST00000470942 IGFBP4P22692 258 aa17.66■□□□□ 0.42
HDAC6-218ENST00000470942 TAP1Q03518 808 aa17.66■□□□□ 0.42
HDAC6-218ENST00000470942 MKRN4PQ13434 485 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-218ENST00000470942 USP38Q8NB14 1042 aa17.66■□□□□ 0.42
HDAC6-218ENST00000470942 BANK1Q8NDB2 785 aa17.66■□□□□ 0.42
HDAC6-218ENST00000470942 ARNTL2Q8WYA1 636 aa17.66■□□□□ 0.42
HDAC6-218ENST00000470942 AGO3Q9H9G7 860 aaKnown RBP17.66■□□□□ 0.42
HDAC6-218ENST00000470942 SEPT9Q9UHD8 586 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-218ENST00000470942 EML1O00423 815 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 PAK2Q13177 524 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 PPP2R5CQ13362 524 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 XKR3Q5GH77 459 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 EFCAB12Q6NXP0 572 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 SLFN12Q8IYM2 578 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 HAS1Q92839 578 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 TOP1MTQ969P6 601 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 PPP1R16BQ96T49 567 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 VAV3Q9UKW4 847 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 INSL6Q9Y581 213 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 SQORQ9Y6N5 450 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 KDM3AQ9Y4C1 1321 aa17.65■□□□□ 0.42
HDAC6-218ENST00000470942 CHD7Q9P2D1 2997 aa17.64■□□□□ 0.42
HDAC6-218ENST00000470942 CDH23Q9H251 3354 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 RFXAPO00287 272 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 ENPP3O14638 875 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 VTNP04004 478 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 ATP2B1P20020 1258 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 TMOD1P28289 359 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 CLCN3P51790 818 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 PSMC5P62195 406 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 TBC1D8BQ0IIM8 1120 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 GNL2Q13823 731 aaKnown RBP17.64■□□□□ 0.41
HDAC6-218ENST00000470942 ADGRE1Q14246 886 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 MTERF2Q49AM1 385 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 NCAPH2Q6IBW4 605 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 LRRC71Q8N4P6 559 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 PPM1EQ8WY54 764 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 MAP7D2Q96T17 732 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 CDHR5Q9HBB8 845 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 PADI3Q9ULW8 664 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 AKT3Q9Y243 479 aa17.64■□□□□ 0.41
HDAC6-218ENST00000470942 NFX1Q12986 1120 aaKnown RBP17.63■□□□□ 0.41
HDAC6-218ENST00000470942 CALCRLQ16602 461 aa17.63■□□□□ 0.41
HDAC6-218ENST00000470942 KIZQ2M2Z5 673 aa17.63■□□□□ 0.41
HDAC6-218ENST00000470942 TMEM266Q2M3C6 531 aa17.63■□□□□ 0.41
HDAC6-218ENST00000470942 SPRED2Q7Z698 418 aa17.63■□□□□ 0.41
HDAC6-218ENST00000470942 TBC1D32Q96NH3 1257 aa17.63■□□□□ 0.41
HDAC6-218ENST00000470942 YME1L1Q96TA2 773 aa17.63■□□□□ 0.41
HDAC6-218ENST00000470942 SH2D3AQ9BRG2 576 aa17.63■□□□□ 0.41
HDAC6-218ENST00000470942 NIFKQ9BYG3 293 aaKnown RBP17.63■□□□□ 0.41
HDAC6-218ENST00000470942 NOC2LQ9Y3T9 749 aaKnown RBP17.63■□□□□ 0.41
HDAC6-218ENST00000470942 TRANK1O15050 2925 aa17.63■□□□□ 0.41
HDAC6-218ENST00000470942 LINC01553A4QN01 128 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 TMEM150BA6NC51 233 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 NEMFO60524 1076 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 DKC1O60832 514 aaKnown RBP eCLIP17.62■□□□□ 0.413e-10■■■■■ 48.8
HDAC6-218ENST00000470942 RPS6KA5O75582 802 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 P4HBP07237 508 aaKnown RBP17.62■□□□□ 0.41
HDAC6-218ENST00000470942 QARSP47897 775 aaKnown RBP17.62■□□□□ 0.41
HDAC6-218ENST00000470942 HTRA4P83105 476 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-218ENST00000470942 EPHA7Q15375 998 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 IL27Q8NEV9 243 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 FBXO18Q8NFZ0 1043 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 OSMRQ99650 979 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 FTHL17Q9BXU8 183 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 MTUS1Q9ULD2 1270 aa17.62■□□□□ 0.41
HDAC6-218ENST00000470942 TTC3P53804 2025 aa17.61■□□□□ 0.41
HDAC6-218ENST00000470942 EPOPA6NHQ4 379 aa17.61■□□□□ 0.41
HDAC6-218ENST00000470942 WNT7AO00755 349 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms