RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 FAM184BQ9ULE4 1060 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 DNAJC25-GNG10A0A024R161 153 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 AKR1B15C9JRZ8 316 aaPredicted RBP12.13□□□□□ -0.47
SND1-208ENST00000470463 H0YCG3 227 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 TRAF5O00463 557 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 STX10O60499 249 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 ATP9AO75110 1047 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 RGS20O76081 388 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 GJA5P36382 358 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 PMS1P54277 932 aaKnown RBP12.13□□□□□ -0.47
SND1-208ENST00000470463 INHBEP58166 350 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 UBXN1Q04323 297 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 MYBPC2Q14324 1141 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 HSP90AA2PQ14568 343 aaPredicted RBP12.13□□□□□ -0.47
SND1-208ENST00000470463 MAN2A1Q16706 1144 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 HSP90AA4PQ58FG1 418 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.13□□□□□ -0.47
SND1-208ENST00000470463 EPM2AIP1Q7L775 607 aaPredicted RBP12.13□□□□□ -0.47
SND1-208ENST00000470463 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
SND1-208ENST00000470463 SAPCD2Q86UD0 394 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 ZC3H3Q8IXZ2 948 aaKnown RBP12.13□□□□□ -0.47
SND1-208ENST00000470463 MORC4Q8TE76 937 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 KIFAP3Q92845 792 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 NOC4LQ9BVI4 516 aaKnown RBP12.13□□□□□ -0.47
SND1-208ENST00000470463 MCOLN1Q9GZU1 580 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 KCTD10Q9H3F6 313 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 KCNF1Q9H3M0 494 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 TMEM206Q9H813 350 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 METTL14Q9HCE5 456 aaKnown RBP12.13□□□□□ -0.47
SND1-208ENST00000470463 INTS13Q9NVM9 706 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 SLC5A4Q9NY91 659 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 IVNS1ABPQ9Y6Y0 642 aa12.13□□□□□ -0.47
SND1-208ENST00000470463 MANSC4A6NHS7 340 aaPredicted RBP12.12□□□□□ -0.47
SND1-208ENST00000470463 SLC16A3O15427 465 aaKnown RBP12.12□□□□□ -0.47
SND1-208ENST00000470463 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 DGAT1O75907 488 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 ATG7O95352 703 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 GCNT3O95395 438 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 CCNE2O96020 404 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 SMTNP53814 917 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 ACTR2P61160 394 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 CNTN2Q02246 1040 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 NOLC1Q14978 699 aaKnown RBP eCLIP12.12□□□□□ -0.47
SND1-208ENST00000470463 TSR1Q2NL82 804 aaKnown RBP12.12□□□□□ -0.47
SND1-208ENST00000470463 XKR3Q5GH77 459 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 FIGNQ5HY92 759 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 ODR4Q5SWX8 454 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 FAM160B1Q5W0V3 765 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 ABHD15Q6UXT9 468 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 CREBRFQ8IUR6 639 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 MCPH1Q8NEM0 835 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 TMEM174Q8WUU8 243 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 SCFD1Q8WVM8 642 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 HVCN1Q96D96 273 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
SND1-208ENST00000470463 FAM167AQ96KS9 214 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 ZNF830Q96NB3 372 aaPredicted RBP12.12□□□□□ -0.47
SND1-208ENST00000470463 ERGIC2Q96RQ1 377 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 VPS16Q9H269 839 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 ST6GALNAC4Q9H4F1 302 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 SPTLC3Q9NUV7 552 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
SND1-208ENST00000470463 NPHP3-ACAD11A0A0J9YXS1 232 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 BTBD19C9JJ37 291 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 KIF2AO00139 706 aaPredicted RBP12.11□□□□□ -0.47
SND1-208ENST00000470463 PES1O00541 588 aaKnown RBP12.11□□□□□ -0.47
SND1-208ENST00000470463 SUPT20HL2P0C7V6 817 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 PLS3P13797 630 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 MAPK4P31152 587 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 RTP1P59025 263 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 CCZ1BP86790 482 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
SND1-208ENST00000470463 RAD51AP2Q09MP3 1159 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 TBC1D8BQ0IIM8 1120 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 NOGQ13253 232 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 ADAM9Q13443 819 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 IRF5Q13568 498 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 FAM110CQ1W6H9 321 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 XKR9Q5GH70 373 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 METTL7BQ6UX53 244 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 LRRC55Q6ZSA7 311 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 FRMD5Q7Z6J6 570 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 ZNF397Q8NF99 534 aaPredicted RBP12.11□□□□□ -0.47
SND1-208ENST00000470463 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
SND1-208ENST00000470463 MKNK1Q9BUB5 465 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 TXNRD2Q9NNW7 524 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 RRAGDQ9NQL2 400 aaPredicted RBP12.11□□□□□ -0.47
SND1-208ENST00000470463 WRAP73Q9P2S5 460 aaPredicted RBP12.11□□□□□ -0.47
SND1-208ENST00000470463 GABBR1Q9UBS5 961 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 EXOC7Q9UPT5 735 aa12.11□□□□□ -0.47
SND1-208ENST00000470463 DIS3Q9Y2L1 958 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms