RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 PPP4R3AQ6IN85 833 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 SPRED2Q7Z698 418 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 NEK8Q86SG6 692 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.89■□□□□ 0.13
COMMD3-208ENST00000470045 MYOCDQ8IZQ8 938 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 NME8Q8N427 588 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 USP38Q8NB14 1042 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 TNFRSF25Q93038 417 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 GJA10Q969M2 543 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 TOP1MTQ969P6 601 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 FAM167AQ96KS9 214 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 ZBED2Q9BTP6 218 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 GABBR1Q9UBS5 961 aa15.89■□□□□ 0.13
COMMD3-208ENST00000470045 SLC37A4O43826 429 aa15.88■□□□□ 0.13
COMMD3-208ENST00000470045 JAK2O60674 1132 aa15.88■□□□□ 0.13
COMMD3-208ENST00000470045 GCFC2P16383 781 aaKnown RBP15.88■□□□□ 0.13
COMMD3-208ENST00000470045 UGCGQ16739 394 aa15.88■□□□□ 0.13
COMMD3-208ENST00000470045 KIAA0319LQ8IZA0 1049 aa15.88■□□□□ 0.13
COMMD3-208ENST00000470045 CELF4Q9BZC1 486 aaKnown RBP15.88■□□□□ 0.13
COMMD3-208ENST00000470045 AGO3Q9H9G7 860 aaKnown RBP15.88■□□□□ 0.13
COMMD3-208ENST00000470045 KCNMB3Q9NPA1 279 aa15.88■□□□□ 0.13
COMMD3-208ENST00000470045 DDX25Q9UHL0 483 aaKnown RBP15.88■□□□□ 0.13
COMMD3-208ENST00000470045 SAMM50Q9Y512 469 aa15.88■□□□□ 0.13
COMMD3-208ENST00000470045 INSL6Q9Y581 213 aa15.88■□□□□ 0.13
COMMD3-208ENST00000470045 LINC01553A4QN01 128 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 M0QZ92 97 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 OATP04181 439 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 RBM25P49756 843 aaKnown RBP15.87■□□□□ 0.13
COMMD3-208ENST00000470045 ERVK-21P61565 698 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 LETM2Q2VYF4 491 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 EARS2Q5JPH6 523 aaKnown RBP15.87■□□□□ 0.13
COMMD3-208ENST00000470045 PIK3AP1Q6ZUJ8 805 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 CKAP2LQ8IYA6 745 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 LINC01465Q8N7H1 131 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 CEP131Q9UPN4 1083 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 LIMCH1Q9UPQ0 1083 aa15.87■□□□□ 0.13
COMMD3-208ENST00000470045 REV3LO60673 3130 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 TBX3O15119 743 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 CHMP2AO43633 222 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 MMP1P03956 469 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 CD52P31358 61 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 KRT2P35908 639 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 PRKCEQ02156 737 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 TMEM62Q0P6H9 643 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 NR5A1Q13285 461 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 FAM117BQ6P1L5 589 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 FAM43BQ6ZT52 329 aaPredicted RBP15.86■□□□□ 0.13
COMMD3-208ENST00000470045 MIER3Q7Z3K6 550 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 LINC01599Q8WXQ3 324 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 ARNTL2Q8WYA1 636 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 FAM20AQ96MK3 541 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 NAP1L4Q99733 375 aaKnown RBP15.86■□□□□ 0.13
COMMD3-208ENST00000470045 CERS4Q9HA82 394 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 VAV3Q9UKW4 847 aa15.86■□□□□ 0.13
COMMD3-208ENST00000470045 PRRC2BQ5JSZ5 2229 aaKnown RBP15.86■□□□□ 0.13
COMMD3-208ENST00000470045 ARID2Q68CP9 1835 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 FAM205CA6NFA0 338 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 RFXAPO00287 272 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 MAGEB2O15479 319 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 LPXNO60711 386 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 STBD1O95210 358 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 IGFBP4P22692 258 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 PPP2R5CQ13362 524 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 TARBP2Q15633 366 aaKnown RBP15.85■□□□□ 0.13
COMMD3-208ENST00000470045 TGS1Q96RS0 853 aaKnown RBP15.85■□□□□ 0.13
COMMD3-208ENST00000470045 FTHL17Q9BXU8 183 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 RC3H2Q9HBD1 1191 aaKnown RBP15.85■□□□□ 0.13
COMMD3-208ENST00000470045 BRMS1Q9HCU9 246 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 PADI3Q9ULW8 664 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 MTCH2Q9Y6C9 303 aa15.85■□□□□ 0.13
COMMD3-208ENST00000470045 KIAA1671Q9BY89 1806 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 A0A0C4DFX4 3053 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 ENPP3O14638 875 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 GRB10Q13322 594 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 KRT40Q6A162 431 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 CRIPAKQ8N1N5 446 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 TMEM40Q8WWA1 233 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 HAS1Q92839 578 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 CEP89Q96ST8 783 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 LLPHQ9BRT6 129 aaKnown RBP15.84■□□□□ 0.13
COMMD3-208ENST00000470045 NRBP2Q9NSY0 501 aa15.84■□□□□ 0.13
COMMD3-208ENST00000470045 EML1O00423 815 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 CCNT1O60563 726 aaKnown RBP15.83■□□□□ 0.12
COMMD3-208ENST00000470045 GPR32O75388 356 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 SPIRE1Q08AE8 756 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 PAK2Q13177 524 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 XKR3Q5GH77 459 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 TRMT1LQ7Z2T5 733 aaKnown RBP15.83■□□□□ 0.12
COMMD3-208ENST00000470045 RTN4RL1Q86UN2 441 aaPredicted RBP15.83■□□□□ 0.12
COMMD3-208ENST00000470045 CCDC83Q8IWF9 413 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 DIS3L2Q8IYB7 885 aaKnown RBP15.83■□□□□ 0.12
COMMD3-208ENST00000470045 ZSCAN31Q96LW9 406 aaPredicted RBP15.83■□□□□ 0.12
COMMD3-208ENST00000470045 YME1L1Q96TA2 773 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 NIFKQ9BYG3 293 aaKnown RBP15.83■□□□□ 0.12
COMMD3-208ENST00000470045 TSPYL2Q9H2G4 693 aaPredicted RBP15.83■□□□□ 0.12
COMMD3-208ENST00000470045 TMX1Q9H3N1 280 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 SUGCTQ9HAC7 445 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 CDHR5Q9HBB8 845 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 ERVK-5Q9HDB9 667 aa15.83■□□□□ 0.12
COMMD3-208ENST00000470045 SH2B1Q9NRF2 756 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms