RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 BMS1Q14692 1282 aaKnown RBP13.11□□□□□ -0.31
COMMD2-202ENST00000469896 TMEM57Q8N5G2 664 aa13.11□□□□□ -0.31
COMMD2-202ENST00000469896 COLGALT1Q8NBJ5 622 aa13.11□□□□□ -0.31
COMMD2-202ENST00000469896 TMEM87AQ8NBN3 555 aa13.11□□□□□ -0.31
COMMD2-202ENST00000469896 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
COMMD2-202ENST00000469896 COL20A1Q9P218 1284 aa13.11□□□□□ -0.31
COMMD2-202ENST00000469896 HCSTQ9UBK5 93 aa13.11□□□□□ -0.31
COMMD2-202ENST00000469896 SMG5Q9UPR3 1016 aaKnown RBP13.11□□□□□ -0.31
COMMD2-202ENST00000469896 ABCB11O95342 1321 aa13.11□□□□□ -0.31
COMMD2-202ENST00000469896 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 BHMG1C9JSJ3 638 aaPredicted RBP13.1□□□□□ -0.31
COMMD2-202ENST00000469896 GPAA1O43292 621 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 IBSPP21815 317 aaPredicted RBP13.1□□□□□ -0.31
COMMD2-202ENST00000469896 PPM1AP35813 382 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 GATMP50440 423 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 ADAM17P78536 824 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 PPARAQ07869 468 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 SMC1AQ14683 1233 aaKnown RBP13.1□□□□□ -0.31
COMMD2-202ENST00000469896 PHLDB3Q6NSJ2 640 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 TRMT2AQ8IZ69 625 aaKnown RBP13.1□□□□□ -0.31
COMMD2-202ENST00000469896 IFNL3Q8IZI9 196 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 APPBP2Q92624 585 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 PXMP2Q9NR77 195 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 CA14Q9ULX7 337 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 PCDHGA10Q9Y5H3 936 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 SQORQ9Y6N5 450 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 PLXNA4Q9HCM2 1894 aa13.1□□□□□ -0.31
COMMD2-202ENST00000469896 KIAA1671Q9BY89 1806 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 KRBA1A5PL33 1030 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 PATL2C9JE40 543 aaKnown RBP13.09□□□□□ -0.31
COMMD2-202ENST00000469896 M0QZ92 97 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 PROS1P07225 676 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
COMMD2-202ENST00000469896 MYCLP12524 364 aaPredicted RBP13.09□□□□□ -0.31
COMMD2-202ENST00000469896 SHC2P98077 582 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 PAK2Q13177 524 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 IER5Q5VY09 327 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 FAM43BQ6ZT52 329 aaPredicted RBP13.09□□□□□ -0.31
COMMD2-202ENST00000469896 RTN4RL1Q86UN2 441 aaPredicted RBP13.09□□□□□ -0.31
COMMD2-202ENST00000469896 NAPBQ9H115 298 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 EPC1Q9H2F5 836 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 AGO3Q9H9G7 860 aaKnown RBP13.09□□□□□ -0.31
COMMD2-202ENST00000469896 FBXO4Q9UKT5 387 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 CDY2AQ9Y6F7 541 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 ZZEF1O43149 2961 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 MYH7BA7E2Y1 1941 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 KIAA1217Q5T5P2 1943 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 MAST4O15021 2626 aa13.09□□□□□ -0.31
COMMD2-202ENST00000469896 GCN1Q92616 2671 aaKnown RBP13.08□□□□□ -0.31
COMMD2-202ENST00000469896 ANP32CO43423 234 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 LAMTOR5O43504 91 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 TBC1D4O60343 1298 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
COMMD2-202ENST00000469896 CA8P35219 290 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 SARSP49591 514 aaKnown RBP13.08□□□□□ -0.32
COMMD2-202ENST00000469896 MRPS6P82932 125 aaKnown RBP13.08□□□□□ -0.32
COMMD2-202ENST00000469896 CEP85Q6P2H3 762 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 C12orf76Q8N812 135 aaPredicted RBP13.08□□□□□ -0.32
COMMD2-202ENST00000469896 MRPL43Q8N983 215 aaKnown RBP13.08□□□□□ -0.32
COMMD2-202ENST00000469896 TBC1D5Q92609 795 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 OSBP2Q969R2 916 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 TYW1Q9NV66 732 aaKnown RBP13.08□□□□□ -0.32
COMMD2-202ENST00000469896 DLGAP2Q9P1A6 1054 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 TUBE1Q9UJT0 475 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 TNNQ9UQP3 1299 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 FRYQ5TBA9 3013 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 FANCMQ8IYD8 2048 aa13.08□□□□□ -0.32
COMMD2-202ENST00000469896 CNOT1A5YKK6 2376 aaKnown RBP13.07□□□□□ -0.32
COMMD2-202ENST00000469896 C2orf71A6NGG8 1288 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 NARSO43776 548 aaKnown RBP13.07□□□□□ -0.32
COMMD2-202ENST00000469896 CLASP2O75122 1294 aaKnown RBP13.07□□□□□ -0.32
COMMD2-202ENST00000469896 PDHBP11177 359 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 SRFP11831 508 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 NOVP48745 357 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 SP2Q02086 613 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 ZNF543Q08ER8 600 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 CABP7Q86V35 215 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 DNAJB3Q8WWF6 145 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 ARHGEF3Q9NR81 526 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 SPATA6Q9NWH7 488 aaPredicted RBP13.07□□□□□ -0.32
COMMD2-202ENST00000469896 PADI3Q9ULW8 664 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 MRPL11Q9Y3B7 192 aaKnown RBP13.07□□□□□ -0.32
COMMD2-202ENST00000469896 SPEGQ15772 3267 aa13.07□□□□□ -0.32
COMMD2-202ENST00000469896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.06□□□□□ -0.32
COMMD2-202ENST00000469896 ZFYP08048 801 aaPredicted RBP13.06□□□□□ -0.32
COMMD2-202ENST00000469896 PMLP29590 882 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 PPFIA1Q13136 1202 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 NEDD9Q14511 834 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 CDC37Q16543 378 aaPredicted RBP13.06□□□□□ -0.32
COMMD2-202ENST00000469896 GPATCH4Q5T3I0 446 aaKnown RBP13.06□□□□□ -0.32
COMMD2-202ENST00000469896 METTL7BQ6UX53 244 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 TRIM50Q86XT4 487 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
COMMD2-202ENST00000469896 PJA1Q8NG27 643 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 SHDQ96IW2 340 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 TMEM47Q9BQJ4 181 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 PDCD2LQ9BRP1 358 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 BCO2Q9BYV7 579 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 ZSCAN32Q9NX65 697 aa13.06□□□□□ -0.32
COMMD2-202ENST00000469896 RAB23Q9ULC3 237 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms