RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TMX2Q9Y320 296 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 HYOU1Q9Y4L1 999 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 PCDHA2Q9Y5H9 948 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 A0A087X0T9 212 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 EIF3CLB5ME19 914 aaKnown RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 FAM228BP0C875 321 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 FECHP22830 423 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 VAV2P52735 878 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 KLHL30Q0D2K2 578 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 ZCWPW2Q504Y3 356 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 SFMBT2Q5VUG0 894 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 RINT1Q6NUQ1 792 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 LEKR1Q6ZMV7 388 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 RIN2Q8WYP3 895 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 WNK4Q96J92 1243 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 CAMKK2Q96RR4 588 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 EIF3CQ99613 913 aaKnown RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 KCTD10Q9H3F6 313 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 VAV3Q9UKW4 847 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 CNTNAP1P78357 1384 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 IVLP07476 585 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 SOX10P56693 466 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 AMPD2Q01433 879 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 SF3B2Q13435 895 aaKnown RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 ODR4Q5SWX8 454 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 PDXDC1Q6P996 788 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 OTOP1Q7RTM1 612 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 ZKSCAN4Q969J2 545 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 UNC45AQ9H3U1 944 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 VCPKMTQ9H867 229 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 CHORDC1Q9UHD1 332 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 AJAP1Q9UKB5 411 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-203ENST00000469739 USP20Q9Y2K6 914 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 CEP83Q9Y592 693 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 ARFGEF1Q9Y6D6 1849 aa10.34□□□□□ -0.75
TOP3A-203ENST00000469739 IGLV3-22A0A075B6J6 115 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 CCDC172P0C7W6 258 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 CAP2P40123 477 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 PSMD2Q13200 908 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 ARHGAP44Q17R89 818 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 KNOP1Q1ED39 458 aaKnown RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 KIAA0753Q2KHM9 967 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 SYCP3Q8IZU3 236 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 SYT2Q8N9I0 419 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 JDP2Q8WYK2 163 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 FUT8Q9BYC5 575 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 GPRC5CQ9NQ84 441 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 CTDP1Q9Y5B0 961 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 H3BQF6 201 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 IPO5O00410 1097 aaKnown RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 FOSP01100 380 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 NR3C1P04150 777 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 XRCC5P13010 732 aaKnown RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 KCNA3P22001 575 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 SPP2Q13103 211 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 ORC2Q13416 577 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 MTMR2Q13614 643 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 CEP55Q53EZ4 464 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 EP400NLQ6ZTU2 488 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 TRAPPC11Q7Z392 1133 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 TRIM59Q8IWR1 403 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 ZSWIM2Q8NEG5 633 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 SUPT20HQ8NEM7 779 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 RNF25Q96BH1 459 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 LXNQ9BS40 222 aa10.33□□□□□ -0.76
TOP3A-203ENST00000469739 HERC5Q9UII4 1024 aaKnown RBP10.33□□□□□ -0.76
TOP3A-203ENST00000469739 MYBL2P10244 700 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 ITGB5P18084 799 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 KLRC1P26715 233 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 FKBP1AP62942 108 aaKnown RBP10.32□□□□□ -0.76
TOP3A-203ENST00000469739 SPDYE2Q495Y8 402 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 SLC9C1Q4G0N8 1177 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 CCDC181Q5TID7 509 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 CHURC1Q8WUH1 139 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 CRYGNQ8WXF5 182 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 KIFC3Q9BVG8 833 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 KDM4CQ9H3R0 1056 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 ZNRF3Q9ULT6 936 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 TELO2Q9Y4R8 837 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 CYP3A7-CYP3A51PA0A087WV96 503 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 ESYT3A0FGR9 886 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 GOLGA8IPA6NC78 632 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 GOLGA8JA6NMD2 632 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 TACC1O75410 805 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 VIL1P09327 827 aaKnown RBP10.32□□□□□ -0.76
TOP3A-203ENST00000469739 CYP3A7P24462 503 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 USP8P40818 1118 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 PPP1R2P41236 205 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 LLGL1Q15334 1064 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 NBPF12Q5TAG4 269 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-203ENST00000469739 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-203ENST00000469739 FAM178BQ8IXR5 827 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 CCDC43Q96MW1 224 aaKnown RBP10.32□□□□□ -0.76
TOP3A-203ENST00000469739 GLT8D2Q9H1C3 349 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 MYOZ2Q9NPC6 264 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 VPS18Q9P253 973 aa10.32□□□□□ -0.76
TOP3A-203ENST00000469739 COL4A5P29400 1685 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms