RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 FOSP01100 380 aaPredicted RBP13.97□□□□□ -0.17
HDAC3-204ENST00000469207 SREBF1P36956 1147 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 NRIP1P48552 1158 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 NDUFV1P49821 464 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 NME8Q8N427 588 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 P2RX5Q93086 422 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 MSLNLQ96KJ4 702 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 ADAM2Q99965 735 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 ERVK-5Q9HDB9 667 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 ZNF302Q9NR11 478 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 BARHL2Q9NY43 387 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 CD207Q9UJ71 328 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 LRFN2Q9ULH4 789 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 ST3GAL5Q9UNP4 418 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 FAM50BQ9Y247 325 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 PCDHB7Q9Y5E2 793 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 KIAA1671Q9BY89 1806 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 IGLV3-22A0A075B6J6 115 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 TBKBP1A7MCY6 615 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 HBP1O60381 514 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 RPS6KA5O75582 802 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 STAG3L1P0CL83 205 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 ERVFC1P60507 584 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 KIZQ2M2Z5 673 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 PDXDC2PQ6P474 469 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 HFE2Q6ZVN8 426 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 RNF135Q8IUD6 432 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 MICAL1Q8TDZ2 1067 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 ATP8B4Q8TF62 1192 aa13.96□□□□□ -0.17
HDAC3-204ENST00000469207 TNPO1Q92973 898 aaKnown RBP13.96□□□□□ -0.17
HDAC3-204ENST00000469207 ZNF668Q96K58 619 aaPredicted RBP13.96□□□□□ -0.17
HDAC3-204ENST00000469207 BARX2Q9UMQ3 279 aaPredicted RBP13.96□□□□□ -0.17
HDAC3-204ENST00000469207 WDFY4Q6ZS81 3184 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 KDM3AQ9Y4C1 1321 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 EVPLQ92817 2033 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 TRIOO75962 3097 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 GLP2RO95838 553 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 VTNP04004 478 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 SARSP49591 514 aaKnown RBP13.95□□□□□ -0.18
HDAC3-204ENST00000469207 APOBRQ0VD83 1088 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 SMAD4Q13485 552 aaKnown RBP13.95□□□□□ -0.18
HDAC3-204ENST00000469207 SPOUT1Q5T280 376 aaKnown RBP13.95□□□□□ -0.18
HDAC3-204ENST00000469207 RNF20Q5VTR2 975 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 PPP1R18Q6NYC8 613 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 CKAP2LQ8IYA6 745 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 RASGRP4Q8TDF6 673 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 CRYGNQ8WXF5 182 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 OSMRQ99650 979 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 RGS18Q9NS28 235 aa13.95□□□□□ -0.18
HDAC3-204ENST00000469207 TYW1Q9NV66 732 aaKnown RBP13.95□□□□□ -0.18
HDAC3-204ENST00000469207 DENND3A2RUS2 1198 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 C9IYK1 514 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 IPO5O00410 1097 aaKnown RBP13.94□□□□□ -0.18
HDAC3-204ENST00000469207 EDIL3O43854 480 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 GPR32O75388 356 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 RPLP2P05387 115 aaKnown RBP13.94□□□□□ -0.18
HDAC3-204ENST00000469207 FGFR1P11362 822 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 AP3B2Q13367 1082 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 PKN1Q16512 942 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 PFKFB3Q16875 520 aaPredicted RBP13.94□□□□□ -0.18
HDAC3-204ENST00000469207 TSGA10IPQ3SY00 556 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 NAALADL2Q58DX5 795 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 ZNF484Q5JVG2 852 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 FAM160B1Q5W0V3 765 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 MIS18BP1Q6P0N0 1132 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 FAM228AQ86W67 206 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 METTL13Q8N6R0 699 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 EFHBQ8N7U6 833 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 VN1R2Q8NFZ6 395 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 GJA10Q969M2 543 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 FBXL18Q96ME1 805 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 ZNF577Q9BSK1 485 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 PLXNA4Q9HCM2 1894 aa13.94□□□□□ -0.18
HDAC3-204ENST00000469207 MUC6Q6W4X9 2439 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 C22orf31O95567 290 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 EYA4O95677 639 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 CYP3A4P08684 503 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 SLC26A2P50443 739 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 CLCN3P51790 818 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 BMP2KLQ5H9B9 411 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 LRRC55Q6ZSA7 311 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 Q6ZUG5 572 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 SLC24A5Q71RS6 500 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 NIPA1Q7RTP0 329 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 PHKBQ93100 1093 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 APOL5Q9BWW9 433 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 UPF3BQ9BZI7 483 aaKnown RBP13.93□□□□□ -0.18
HDAC3-204ENST00000469207 CWH43Q9H720 699 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 TLE6Q9H808 572 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 GABBR1Q9UBS5 961 aa13.93□□□□□ -0.18
HDAC3-204ENST00000469207 MAFBQ9Y5Q3 323 aaPredicted RBP13.93□□□□□ -0.18
HDAC3-204ENST00000469207 FGF18O76093 207 aa13.92□□□□□ -0.18
HDAC3-204ENST00000469207 PBX3P40426 434 aa13.92□□□□□ -0.18
HDAC3-204ENST00000469207 METAP2P50579 478 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDAC3-204ENST00000469207 NLRP11P59045 1033 aaKnown RBP13.92□□□□□ -0.18
HDAC3-204ENST00000469207 FAM189BP81408 668 aa13.92□□□□□ -0.18
HDAC3-204ENST00000469207 DSC3Q14574 896 aa13.92□□□□□ -0.18
HDAC3-204ENST00000469207 PRR16Q569H4 304 aa13.92□□□□□ -0.18
HDAC3-204ENST00000469207 HERC4Q5GLZ8 1057 aaPredicted RBP13.92□□□□□ -0.18
HDAC3-204ENST00000469207 LRRC71Q8N4P6 559 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms