RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 GSTA4O15217 222 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 CPEP16870 476 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 ID4P47928 161 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 SCNN1BP51168 640 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 FAM50AQ14320 339 aaKnown RBP7.03□□□□□ -1.28
LSM5-209ENST00000468872 SKIDA1Q1XH10 827 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 BRDTQ58F21 947 aaPredicted RBP7.03□□□□□ -1.28
LSM5-209ENST00000468872 NUDT10Q8NFP7 164 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 IGDCC4Q8TDY8 1250 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 USP7Q93009 1102 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 NUDT11Q96G61 164 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 C8orf49Q96NF6 230 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 BARX1Q9HBU1 254 aaPredicted RBP7.03□□□□□ -1.28
LSM5-209ENST00000468872 PPP4R1LQ9P1A2 415 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 B4GALT6Q9UBX8 382 aa7.03□□□□□ -1.28
LSM5-209ENST00000468872 TCRBV5S4A2TA0A5A2 114 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 ACOT7O00154 380 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 BRINP1O60477 761 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 KLHL18O94889 574 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 KNG1P01042 644 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 CHGBP05060 677 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 ENO2P09104 434 aaPredicted RBP7.02□□□□□ -1.29
LSM5-209ENST00000468872 PDE6AP16499 860 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 ADCYAP1R1P41586 468 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 LACTBP83111 547 aaPredicted RBP7.02□□□□□ -1.29
LSM5-209ENST00000468872 PFKPQ01813 784 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 NFATC3Q12968 1075 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 SMAD2Q15796 467 aaKnown RBP7.02□□□□□ -1.29
LSM5-209ENST00000468872 SMC1BQ8NDV3 1235 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 WDR66Q8TBY9 1149 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 SH3RF2Q8TEC5 729 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 TTC1Q99614 292 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 CD244Q9BZW8 370 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 IFT22Q9H7X7 185 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 SMURF1Q9HCE7 757 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 CABP5Q9NP86 173 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 KLHL42Q9P2K6 505 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 ZFP69BQ9UJL9 534 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 MYRFQ9Y2G1 1151 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 PHLDB1Q86UU1 1377 aa7.02□□□□□ -1.29
LSM5-209ENST00000468872 ZNF839A8K0R7 811 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 ALG1L2C9J202 215 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 ZNF561-AS1K7EIQ3 104 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 GPR39O43194 453 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 FBXO21O94952 628 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 AMY2AP04746 511 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 ATP2A2P16615 1042 aaKnown RBP7.01□□□□□ -1.29
LSM5-209ENST00000468872 AMY2BP19961 511 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 GLRBP48167 497 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 JAM2P57087 298 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 CRY1Q16526 586 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 CPZQ66K79 652 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 CREB3L3Q68CJ9 461 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 OSTM1Q86WC4 334 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 STPG3Q8N7X2 389 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 C1QTNF3Q9BXJ4 246 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 KCND1Q9NSA2 647 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 ARHGAP20Q9P2F6 1191 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 ADAM29Q9UKF5 820 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 ZDHHC9Q9Y397 364 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 WASHC2CQ9Y4E1 1318 aa7.01□□□□□ -1.29
LSM5-209ENST00000468872 PTPDC1A2A3K4 754 aa7□□□□□ -1.29
LSM5-209ENST00000468872 ZEB2O60315 1214 aa7□□□□□ -1.29
LSM5-209ENST00000468872 B4GALT4O60513 344 aa7□□□□□ -1.29
LSM5-209ENST00000468872 GAS7O60861 476 aa7□□□□□ -1.29
LSM5-209ENST00000468872 FKBP9O95302 570 aa7□□□□□ -1.29
LSM5-209ENST00000468872 ZNF20P17024 532 aa7□□□□□ -1.29
LSM5-209ENST00000468872 GUCY2FP51841 1108 aa7□□□□□ -1.29
LSM5-209ENST00000468872 EPHB4P54760 987 aa7□□□□□ -1.29
LSM5-209ENST00000468872 IL2P60568 153 aa7□□□□□ -1.29
LSM5-209ENST00000468872 PPP2CBP62714 309 aa7□□□□□ -1.29
LSM5-209ENST00000468872 PPP2CAP67775 309 aa7□□□□□ -1.29
LSM5-209ENST00000468872 PUM1Q14671 1186 aaKnown RBP eCLIP7□□□□□ -1.29
LSM5-209ENST00000468872 GPR19Q15760 415 aa7□□□□□ -1.29
LSM5-209ENST00000468872 FSTL4Q6MZW2 842 aa7□□□□□ -1.29
LSM5-209ENST00000468872 ARHGEF18Q6ZSZ5 1173 aa7□□□□□ -1.29
LSM5-209ENST00000468872 Q6ZUG5 572 aa7□□□□□ -1.29
LSM5-209ENST00000468872 FKBP9P1Q75LS8 142 aa7□□□□□ -1.29
LSM5-209ENST00000468872 OTOP1Q7RTM1 612 aa7□□□□□ -1.29
LSM5-209ENST00000468872 C2orf69Q8N8R5 385 aa7□□□□□ -1.29
LSM5-209ENST00000468872 CHST13Q8NET6 341 aa7□□□□□ -1.29
LSM5-209ENST00000468872 CHTF18Q8WVB6 975 aa7□□□□□ -1.29
LSM5-209ENST00000468872 GPR101Q96P66 508 aaPredicted RBP7□□□□□ -1.29
LSM5-209ENST00000468872 THG1LQ9NWX6 298 aaKnown RBP7□□□□□ -1.29
LSM5-209ENST00000468872 ST6GALNAC2Q9UJ37 374 aa7□□□□□ -1.29
LSM5-209ENST00000468872 ZKSCAN5Q9Y2L8 839 aa7□□□□□ -1.29
LSM5-209ENST00000468872 NPEPPSL1A6NEC2 478 aa6.99□□□□□ -1.29
LSM5-209ENST00000468872 KCNK3O14649 394 aa6.99□□□□□ -1.29
LSM5-209ENST00000468872 IL18BPO95998 194 aa6.99□□□□□ -1.29
LSM5-209ENST00000468872 KRT15P19012 456 aa6.99□□□□□ -1.29
LSM5-209ENST00000468872 TMPRSS15P98073 1019 aa6.99□□□□□ -1.29
LSM5-209ENST00000468872 SART3Q15020 963 aaKnown RBP6.99□□□□□ -1.29
LSM5-209ENST00000468872 RNF219Q5W0B1 726 aaPredicted RBP6.99□□□□□ -1.29
LSM5-209ENST00000468872 ARHGAP36Q6ZRI8 547 aa6.99□□□□□ -1.29
LSM5-209ENST00000468872 SPATS2Q86XZ4 545 aaKnown RBP6.99□□□□□ -1.29
LSM5-209ENST00000468872 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
LSM5-209ENST00000468872 METTL14Q9HCE5 456 aaKnown RBP6.99□□□□□ -1.29
LSM5-209ENST00000468872 JADE2Q9NQC1 790 aa6.99□□□□□ -1.29
LSM5-209ENST00000468872 SRPK3Q9UPE1 567 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms