RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 PDCLQ13371 301 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 DCAF17Q5H9S7 520 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 MREGQ8N565 214 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 ETNPPLQ8TBG4 499 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 WHAMMQ8TF30 809 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 PIK3R5Q8WYR1 880 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 CCDC17Q96LX7 622 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 MRIQ9BWK5 157 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 PI4KBQ9UBF8 816 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 MYH4Q9Y623 1939 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 ATAD5Q96QE3 1844 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 CALUO43852 315 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 MYBP10242 640 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 XRCC5P13010 732 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 HOXD13P35453 343 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 CERKLQ49MI3 558 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 SLFN13Q68D06 897 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 SYT2Q8N9I0 419 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 FAM107BQ9H098 131 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 NAGPAQ9UK23 515 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 SIPA1L1O43166 1804 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 SPATA31C1P0DKV0 1188 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 SNAP25P60880 206 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 HDLBPQ00341 1268 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 AP3B2Q13367 1082 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 SF3B2Q13435 895 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 PTPROQ16827 1216 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 TTC31Q49AM3 519 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 TCERG1LQ5VWI1 586 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 ALKBH5Q6P6C2 394 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 MOXD1Q6UVY6 613 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 EPM2AIP1Q7L775 607 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 P2RX7Q99572 595 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 TMEM59LQ9UK28 342 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 A6NNZ2 444 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 CES2O00748 559 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 CEP104O60308 925 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 CLSTN1O94985 981 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 GDF11O95390 407 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 RPA1P27694 616 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 IFI16Q16666 785 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 TUBB8Q3ZCM7 444 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 PBKQ96KB5 322 aa17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 PRMT6Q96LA8 375 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-211ENST00000468468 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 PDXKO00764 312 aa17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 AKAP3O75969 853 aa17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 CD302Q8IX05 232 aa17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 DCAF4Q8WV16 495 aa17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 CRYGNQ8WXF5 182 aa17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 FAM169AQ9Y6X4 670 aa17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 A0A087WUV0 522 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 BRD2P25440 801 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-211ENST00000468468 RSPH10B2B2RC85 870 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 RSPH10BP0C881 870 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 HLTFQ14527 1009 aaKnown RBP eCLIP17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 EPHA7Q15375 998 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 LRRC57Q8N9N7 239 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 TAF1DQ9H5J8 278 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 SAMM50Q9Y512 469 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 GREB1LQ9C091 1923 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 TBX3O15119 743 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 ZEB2O60315 1214 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 FLOT1O75955 427 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 NR3C1P04150 777 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 CASP4P49662 377 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 CYP4A11Q02928 519 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 Q4G0T1 1027 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 KDM7AQ6ZMT4 941 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 TADA2BQ86TJ2 420 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 SIAH1Q8IUQ4 282 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 SCFD2Q8WU76 684 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 MKL1Q969V6 931 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 ISCUQ9H1K1 167 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 BCAS3Q9H6U6 928 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 TYW1Q9NV66 732 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 AJAP1Q9UKB5 411 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 TMCO5BA8MYB1 307 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 FAM86B1E9PN63 330 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 CLIC2O15247 247 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 FAM86B2P0C5J1 330 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 PRKCIP41743 596 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 ERVK-9P63128 1117 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 USH1GQ495M9 461 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 MAATS1Q7Z4T9 603 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 TPCN2Q8NHX9 752 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 ACTRT1Q8TDG2 376 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 LENG9Q96B70 501 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 AP1M1Q9BXS5 423 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 BHMT2Q9H2M3 363 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 METTL14Q9HCE5 456 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms