RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 GJB5O95377 273 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 KCNJ6P48051 423 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 PRKCEQ02156 737 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 TRIM29Q14134 588 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 TARBP2Q15633 366 aaKnown RBP17.09■□□□□ 0.33
ATG4B-215ENST00000468018 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATG4B-215ENST00000468018 MIER3Q7Z3K6 550 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 KIAA0319LQ8IZA0 1049 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 SEPT8Q92599 483 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 IFIH1Q9BYX4 1025 aaKnown RBP17.09■□□□□ 0.33
ATG4B-215ENST00000468018 TRPV2Q9Y5S1 764 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 EYSQ5T1H1 3165 aa17.09■□□□□ 0.33
ATG4B-215ENST00000468018 RALGAPA2Q2PPJ7 1873 aa17.08■□□□□ 0.33
ATG4B-215ENST00000468018 COL4A4P53420 1690 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-215ENST00000468018 IER5Q5VY09 327 aa17.08■□□□□ 0.32
ATG4B-215ENST00000468018 TMX3Q96JJ7 454 aa17.08■□□□□ 0.32
ATG4B-215ENST00000468018 NIFKQ9BYG3 293 aaKnown RBP17.08■□□□□ 0.32
ATG4B-215ENST00000468018 FAM49AQ9H0Q0 323 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-215ENST00000468018 FOXP1Q9H334 677 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-215ENST00000468018 ARHGEF15O94989 841 aa17.07■□□□□ 0.32
ATG4B-215ENST00000468018 GHRP10912 638 aa17.07■□□□□ 0.32
ATG4B-215ENST00000468018 MCM2P49736 904 aa17.07■□□□□ 0.32
ATG4B-215ENST00000468018 FOSBP53539 338 aa17.07■□□□□ 0.32
ATG4B-215ENST00000468018 TSHZ1Q6ZSZ6 1077 aa17.07■□□□□ 0.32
ATG4B-215ENST00000468018 TMCO2Q7Z6W1 182 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-215ENST00000468018 CKAP2LQ8IYA6 745 aa17.07■□□□□ 0.32
ATG4B-215ENST00000468018 USP38Q8NB14 1042 aa17.07■□□□□ 0.32
ATG4B-215ENST00000468018 MTMR9Q96QG7 549 aa17.07■□□□□ 0.32
ATG4B-215ENST00000468018 CELF4Q9BZC1 486 aaKnown RBP17.07■□□□□ 0.32
ATG4B-215ENST00000468018 AGO3Q9H9G7 860 aaKnown RBP17.07■□□□□ 0.32
ATG4B-215ENST00000468018 SLC28A3Q9HAS3 691 aa17.07■□□□□ 0.32
ATG4B-215ENST00000468018 IGKV6-21A0A0C4DH24 114 aa17.06■□□□□ 0.32
ATG4B-215ENST00000468018 MAGEB2O15479 319 aa17.06■□□□□ 0.32
ATG4B-215ENST00000468018 CA3P07451 260 aa17.06■□□□□ 0.32
ATG4B-215ENST00000468018 HTRA4P83105 476 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-215ENST00000468018 GUCY1B3Q02153 619 aa17.06■□□□□ 0.32
ATG4B-215ENST00000468018 XKR3Q5GH77 459 aa17.06■□□□□ 0.32
ATG4B-215ENST00000468018 SLFN12Q8IYM2 578 aa17.06■□□□□ 0.32
ATG4B-215ENST00000468018 MYLIPQ8WY64 445 aa17.06■□□□□ 0.32
ATG4B-215ENST00000468018 TOP1MTQ969P6 601 aa17.06■□□□□ 0.32
ATG4B-215ENST00000468018 NRBP2Q9NSY0 501 aa17.06■□□□□ 0.32
ATG4B-215ENST00000468018 KIF28PB7ZC32 967 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 GPR32O75388 356 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 U2AF2P26368 475 aaKnown RBP eCLIP17.05■□□□□ 0.323e-9■■□□□ 14.1
ATG4B-215ENST00000468018 PSMC5P62195 406 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 TAP1Q03518 808 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 TMEM62Q0P6H9 643 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 EPHA7Q15375 998 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 SAFBQ15424 915 aaKnown RBP eCLIP17.05■□□□□ 0.32
ATG4B-215ENST00000468018 PPP2R2DQ66LE6 453 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 FAM43BQ6ZT52 329 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-215ENST00000468018 CRIPAKQ8N1N5 446 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 FAM184AQ8NB25 1140 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 BANK1Q8NDB2 785 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 SP7Q8TDD2 431 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-215ENST00000468018 TMEM40Q8WWA1 233 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 LINC01599Q8WXQ3 324 aa17.05■□□□□ 0.32
ATG4B-215ENST00000468018 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-215ENST00000468018 FNDC1Q4ZHG4 1894 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-215ENST00000468018 LCHNA4D1U4 455 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 M0QZ92 97 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 TLL1O43897 1013 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 AMHP03971 560 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 P4HBP07237 508 aaKnown RBP17.04■□□□□ 0.32
ATG4B-215ENST00000468018 QARSP47897 775 aaKnown RBP17.04■□□□□ 0.32
ATG4B-215ENST00000468018 ORC2Q13416 577 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-215ENST00000468018 ANO5Q75V66 913 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 TRMT1LQ7Z2T5 733 aaKnown RBP17.04■□□□□ 0.32
ATG4B-215ENST00000468018 C4orf19Q8IY42 314 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 RAD9AQ99638 391 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 TMEM60Q9H2L4 133 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 CDHR5Q9HBB8 845 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 RC3H2Q9HBD1 1191 aaKnown RBP17.04■□□□□ 0.32
ATG4B-215ENST00000468018 KIAA1671Q9BY89 1806 aa17.04■□□□□ 0.32
ATG4B-215ENST00000468018 PRRC2BQ5JSZ5 2229 aaKnown RBP17.04■□□□□ 0.32
ATG4B-215ENST00000468018 TMEM150BA6NC51 233 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 NEMFO60524 1076 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 BAG4O95429 457 aaKnown RBP17.03■□□□□ 0.32
ATG4B-215ENST00000468018 CD52P31358 61 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 CLCN3P51790 818 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 CALCRLQ16602 461 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 EFCAB12Q6NXP0 572 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 RTN4RL1Q86UN2 441 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-215ENST00000468018 NOSTRINQ8IVI9 506 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 ZNF710Q8N1W2 664 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 PADI3Q9ULW8 664 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 ATG2AQ2TAZ0 1938 aa17.03■□□□□ 0.32
ATG4B-215ENST00000468018 ENPP3O14638 875 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 DKC1O60832 514 aaKnown RBP eCLIP17.02■□□□□ 0.32
ATG4B-215ENST00000468018 VTNP04004 478 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 TRAPPC10P48553 1259 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 CRYBB1P53674 252 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-215ENST00000468018 ADGRE1Q14246 886 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 SPRED2Q7Z698 418 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 LRRC71Q8N4P6 559 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 HSD17B14Q9BPX1 270 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 LXNQ9BS40 222 aa17.02■□□□□ 0.32
ATG4B-215ENST00000468018 FTHL17Q9BXU8 183 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms