RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 COL1A2P08123 1366 aa19.62■□□□□ 0.73
TRIM56-203ENST00000467847 CCDC196A0A1B0GTZ2 297 aa19.62■□□□□ 0.73
TRIM56-203ENST00000467847 IPO5O00410 1097 aaKnown RBP19.62■□□□□ 0.73
TRIM56-203ENST00000467847 CDC45O75419 566 aa19.62■□□□□ 0.73
TRIM56-203ENST00000467847 ITGB1P05556 798 aa19.62■□□□□ 0.73
TRIM56-203ENST00000467847 GTF2F1P35269 517 aaKnown RBP eCLIP19.62■□□□□ 0.73
TRIM56-203ENST00000467847 ADD1P35611 737 aaKnown RBP19.62■□□□□ 0.73
TRIM56-203ENST00000467847 METAP2P50579 478 aaKnown RBP eCLIP19.62■□□□□ 0.73
TRIM56-203ENST00000467847 DLX2Q07687 328 aaPredicted RBP19.62■□□□□ 0.73
TRIM56-203ENST00000467847 NFX1Q12986 1120 aaKnown RBP19.62■□□□□ 0.73
TRIM56-203ENST00000467847 NAALADL2Q58DX5 795 aa19.62■□□□□ 0.73
TRIM56-203ENST00000467847 ADHFE1Q8IWW8 467 aa19.62■□□□□ 0.73
TRIM56-203ENST00000467847 IGLV3-22A0A075B6J6 115 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 DHX15O43143 795 aaKnown RBP19.61■□□□□ 0.73
TRIM56-203ENST00000467847 DNAJB1P25685 340 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 GATMP50440 423 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 CAMK1Q14012 370 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 ZNF484Q5JVG2 852 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 SWSAP1Q6NVH7 229 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 CKAP2LQ8IYA6 745 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 KIAA0319LQ8IZA0 1049 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 KLHL23Q8NBE8 558 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 PPP2R3CQ969Q6 453 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 FBXL18Q96ME1 805 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 ZNF577Q9BSK1 485 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 ERVK-5Q9HDB9 667 aa19.61■□□□□ 0.73
TRIM56-203ENST00000467847 FNDC1Q4ZHG4 1894 aaPredicted RBP19.6■□□□□ 0.73
TRIM56-203ENST00000467847 PLXNA4Q9HCM2 1894 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 ESYT2A0FGR8 921 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 DENND3A2RUS2 1198 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 C19orf67A6NJJ6 358 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 LINC01565O15544 149 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 TBX10O75333 385 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 RPS6KA5O75582 802 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 CYP3A4P08684 503 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 CPA1P15085 419 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 SARSP49591 514 aaKnown RBP19.6■□□□□ 0.73
TRIM56-203ENST00000467847 APOBRQ0VD83 1088 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 REXO1Q8N1G1 1221 aaKnown RBP19.6■□□□□ 0.73
TRIM56-203ENST00000467847 SPPL3Q8TCT6 385 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 CCDC12Q8WUD4 166 aaPredicted RBP19.6■□□□□ 0.73
TRIM56-203ENST00000467847 CRYGNQ8WXF5 182 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 SNX27Q96L92 541 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 ZMYND12Q9H0C1 365 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 CDHR5Q9HBB8 845 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 C6orf50Q9HD87 102 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 TCEAL9Q9UHQ7 104 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 NOC2LQ9Y3T9 749 aaKnown RBP19.6■□□□□ 0.73
TRIM56-203ENST00000467847 PCDHB7Q9Y5E2 793 aa19.6■□□□□ 0.73
TRIM56-203ENST00000467847 WDR81Q562E7 1941 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 ZBTB42B2RXF5 422 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 MBTPS2O43462 519 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 MGEA5O60502 916 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 NDUFV1P49821 464 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 SETQ01105 290 aaPredicted RBP19.59■□□□□ 0.73
TRIM56-203ENST00000467847 SMAD4Q13485 552 aaKnown RBP19.59■□□□□ 0.73
TRIM56-203ENST00000467847 SMAD2Q15796 467 aaKnown RBP19.59■□□□□ 0.73
TRIM56-203ENST00000467847 ODR4Q5SWX8 454 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 MCTP2Q6DN12 878 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 FAM43BQ6ZT52 329 aaPredicted RBP19.59■□□□□ 0.73
TRIM56-203ENST00000467847 Q6ZUG5 572 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 TMEM40Q8WWA1 233 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 PPP1R16BQ96T49 567 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 POP1Q99575 1024 aaKnown RBP19.59■□□□□ 0.73
TRIM56-203ENST00000467847 ADAM2Q99965 735 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 TBC1D22BQ9NU19 505 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
TRIM56-203ENST00000467847 CD207Q9UJ71 328 aa19.59■□□□□ 0.73
TRIM56-203ENST00000467847 ADAMTS3O15072 1205 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 ATP4AP20648 1035 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 IRS1P35568 1242 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 ADAM15Q13444 863 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 KIZQ2M2Z5 673 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 SPOUT1Q5T280 376 aaKnown RBP19.58■□□□□ 0.72
TRIM56-203ENST00000467847 ZNF746Q6NUN9 644 aaPredicted RBP19.58■□□□□ 0.72
TRIM56-203ENST00000467847 TRMT1LQ7Z2T5 733 aaKnown RBP19.58■□□□□ 0.72
TRIM56-203ENST00000467847 SMAP1Q8IYB5 467 aaPredicted RBP19.58■□□□□ 0.72
TRIM56-203ENST00000467847 METTL13Q8N6R0 699 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 POF1BQ8WVV4 589 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 BBXQ8WY36 941 aaPredicted RBP19.58■□□□□ 0.72
TRIM56-203ENST00000467847 BRF1Q92994 677 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 JAKMIP1Q96N16 626 aaKnown RBP19.58■□□□□ 0.72
TRIM56-203ENST00000467847 UPF3BQ9BZI7 483 aaKnown RBP19.58■□□□□ 0.72
TRIM56-203ENST00000467847 RGS18Q9NS28 235 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 C1orf112Q9NSG2 853 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 ST3GAL5Q9UNP4 418 aa19.58■□□□□ 0.72
TRIM56-203ENST00000467847 MAFBQ9Y5Q3 323 aaPredicted RBP19.58■□□□□ 0.72
TRIM56-203ENST00000467847 GPR182O15218 404 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 PPFIA3O75145 1194 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 C22orf31O95567 290 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 PSAPP07602 524 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 GNA11P29992 359 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 CRYBB1P53674 252 aaPredicted RBP19.57■□□□□ 0.72
TRIM56-203ENST00000467847 PKN1Q16512 942 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 PRR16Q569H4 304 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 SLC24A5Q71RS6 500 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 ADGRD2Q7Z7M1 963 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 OSMRQ99650 979 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 PCDHB12Q9Y5F1 795 aa19.57■□□□□ 0.72
TRIM56-203ENST00000467847 TRIOO75962 3097 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms