RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CRIPAKQ8N1N5 446 aa23.92■■□□□ 1.42
COL9A3-207ENST00000467819 CCDC12Q8WUD4 166 aaPredicted RBP23.92■■□□□ 1.42
COL9A3-207ENST00000467819 PLVAPQ9BX97 442 aa23.92■■□□□ 1.42
COL9A3-207ENST00000467819 TMX1Q9H3N1 280 aa23.92■■□□□ 1.42
COL9A3-207ENST00000467819 LRFN2Q9ULH4 789 aa23.92■■□□□ 1.42
COL9A3-207ENST00000467819 NID2Q14112 1375 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 C5orf42Q9H799 3197 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 MMP1P03956 469 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 ATP4AP20648 1035 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 HSPA4P34932 840 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 GATMP50440 423 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 SETQ01105 290 aaPredicted RBP23.91■■□□□ 1.42
COL9A3-207ENST00000467819 ZNF484Q5JVG2 852 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 RASGRP4Q8TDF6 673 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 PPP1R16BQ96T49 567 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 CDHR5Q9HBB8 845 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 TCEAL9Q9UHQ7 104 aa23.91■■□□□ 1.42
COL9A3-207ENST00000467819 PI4K2BG5E9Z4 385 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 PRPF3O43395 683 aaKnown RBP23.9■■□□□ 1.42
COL9A3-207ENST00000467819 RPS6KA5O75582 802 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 RPS6KB1P23443 525 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 AKAP17AQ02040 695 aaKnown RBP23.9■■□□□ 1.42
COL9A3-207ENST00000467819 CLUL1Q15846 466 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 PRR16Q569H4 304 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 MCTP2Q6DN12 878 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 KIAA0319LQ8IZA0 1049 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 IGFLR1Q9H665 355 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 ERVK-5Q9HDB9 667 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 C11orf16Q9NQ32 467 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 TBC1D22BQ9NU19 505 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 PLAGL2Q9UPG8 496 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 FAM50BQ9Y247 325 aa23.9■■□□□ 1.42
COL9A3-207ENST00000467819 NOC2LQ9Y3T9 749 aaKnown RBP23.9■■□□□ 1.42
COL9A3-207ENST00000467819 ZBTB42B2RXF5 422 aa23.89■■□□□ 1.41
COL9A3-207ENST00000467819 NCK2O43639 380 aa23.89■■□□□ 1.41
COL9A3-207ENST00000467819 MGEA5O60502 916 aa23.89■■□□□ 1.41
COL9A3-207ENST00000467819 GNA11P29992 359 aa23.89■■□□□ 1.41
COL9A3-207ENST00000467819 GTF2F1P35269 517 aaKnown RBP eCLIP23.89■■□□□ 1.41
COL9A3-207ENST00000467819 LTBRP36941 435 aa23.89■■□□□ 1.41
COL9A3-207ENST00000467819 ZNF746Q6NUN9 644 aaPredicted RBP23.89■■□□□ 1.41
COL9A3-207ENST00000467819 TMEM40Q8WWA1 233 aa23.89■■□□□ 1.41
COL9A3-207ENST00000467819 P2RX5Q93086 422 aa23.89■■□□□ 1.41
COL9A3-207ENST00000467819 GPR37L1O60883 481 aa23.88■■□□□ 1.41
COL9A3-207ENST00000467819 C22orf31O95567 290 aa23.88■■□□□ 1.41
COL9A3-207ENST00000467819 ITGB1P05556 798 aa23.88■■□□□ 1.41
COL9A3-207ENST00000467819 DNAJB1P25685 340 aa23.88■■□□□ 1.41
COL9A3-207ENST00000467819 SARSP49591 514 aaKnown RBP23.88■■□□□ 1.41
COL9A3-207ENST00000467819 DLX2Q07687 328 aaPredicted RBP23.88■■□□□ 1.41
COL9A3-207ENST00000467819 CAMK1Q14012 370 aa23.88■■□□□ 1.41
COL9A3-207ENST00000467819 KIZQ2M2Z5 673 aa23.88■■□□□ 1.41
COL9A3-207ENST00000467819 CTC1Q2NKJ3 1217 aa23.88■■□□□ 1.41
COL9A3-207ENST00000467819 BBXQ8WY36 941 aaPredicted RBP23.88■■□□□ 1.41
COL9A3-207ENST00000467819 SLC26A6Q9BXS9 759 aa23.88■■□□□ 1.41
COL9A3-207ENST00000467819 DENND3A2RUS2 1198 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 PSAPP07602 524 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 PLA2G5P39877 138 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 SMAP1Q8IYB5 467 aaPredicted RBP23.87■■□□□ 1.41
COL9A3-207ENST00000467819 METTL13Q8N6R0 699 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 KLHL23Q8NBE8 558 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 BICD2Q8TD16 824 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 FAM122AQ96E09 287 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 OSMRQ99650 979 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 ADAM2Q99965 735 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 VPS54Q9P1Q0 977 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 GABBR1Q9UBS5 961 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 ST3GAL5Q9UNP4 418 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 HCN4Q9Y3Q4 1203 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 SAMM50Q9Y512 469 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 PCDHB7Q9Y5E2 793 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 PCDHA10Q9Y5I2 948 aa23.87■■□□□ 1.41
COL9A3-207ENST00000467819 MAFBQ9Y5Q3 323 aaPredicted RBP23.87■■□□□ 1.41
COL9A3-207ENST00000467819 LINC01565O15544 149 aa23.86■■□□□ 1.41
COL9A3-207ENST00000467819 VTNP04004 478 aa23.86■■□□□ 1.41
COL9A3-207ENST00000467819 CCT2P78371 535 aaKnown RBP23.86■■□□□ 1.41
COL9A3-207ENST00000467819 NTRK3Q16288 839 aa23.86■■□□□ 1.41
COL9A3-207ENST00000467819 NAALADL2Q58DX5 795 aa23.86■■□□□ 1.41
COL9A3-207ENST00000467819 CCDC148Q8NFR7 591 aa23.86■■□□□ 1.41
COL9A3-207ENST00000467819 SPPL3Q8TCT6 385 aa23.86■■□□□ 1.41
COL9A3-207ENST00000467819 RNF26Q9BY78 433 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-207ENST00000467819 AGXT2Q9BYV1 514 aa23.86■■□□□ 1.41
COL9A3-207ENST00000467819 NCOA5Q9HCD5 579 aaKnown RBP23.86■■□□□ 1.41
COL9A3-207ENST00000467819 GPR182O15218 404 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 TBX10O75333 385 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 PSMA5P28066 241 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 CIITAP33076 1130 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 IRS1P35568 1242 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 ZP2Q05996 745 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 ODR4Q5SWX8 454 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 SPOUT1Q5T280 376 aaKnown RBP23.85■■□□□ 1.41
COL9A3-207ENST00000467819 FAM228AQ86W67 206 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 FBXL16Q8N461 479 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 POF1BQ8WVV4 589 aa23.85■■□□□ 1.41
COL9A3-207ENST00000467819 TBKBP1A7MCY6 615 aa23.84■■□□□ 1.41
COL9A3-207ENST00000467819 IFNAR1P17181 557 aa23.84■■□□□ 1.41
COL9A3-207ENST00000467819 CLCN3P51790 818 aa23.84■■□□□ 1.41
COL9A3-207ENST00000467819 CRYBB1P53674 252 aaPredicted RBP23.84■■□□□ 1.41
COL9A3-207ENST00000467819 ADGRD2Q7Z7M1 963 aa23.84■■□□□ 1.41
COL9A3-207ENST00000467819 PPP2R3CQ969Q6 453 aa23.84■■□□□ 1.41
COL9A3-207ENST00000467819 LENG9Q96B70 501 aa23.84■■□□□ 1.41
COL9A3-207ENST00000467819 CCDC136Q96JN2 1154 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms