RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 RFXAPO00287 272 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 CHMP2AO43633 222 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 SLC37A4O43826 429 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 C22orf31O95567 290 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 ERVK-21P61565 698 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 TMEM62Q0P6H9 643 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 ST3GAL1Q11201 340 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 NR5A1Q13285 461 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 EARS2Q5JPH6 523 aaKnown RBP20.46■□□□□ 0.87
CGREF1-208ENST00000467539 TRMT1LQ7Z2T5 733 aaKnown RBP20.46■□□□□ 0.87
CGREF1-208ENST00000467539 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.46■□□□□ 0.87
CGREF1-208ENST00000467539 ARNTL2Q8WYA1 636 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 TNFRSF25Q93038 417 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 LLPHQ9BRT6 129 aaKnown RBP20.46■□□□□ 0.87
CGREF1-208ENST00000467539 PADI3Q9ULW8 664 aa20.46■□□□□ 0.87
CGREF1-208ENST00000467539 LINC01553A4QN01 128 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 TBX3O15119 743 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 CCNT1O60563 726 aaKnown RBP20.45■□□□□ 0.86
CGREF1-208ENST00000467539 UPP2O95045 317 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 MMP1P03956 469 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 OATP04181 439 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 CD52P31358 61 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 KRT40Q6A162 431 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 RTN4RL1Q86UN2 441 aaPredicted RBP20.45■□□□□ 0.86
CGREF1-208ENST00000467539 SP7Q8TDD2 431 aaPredicted RBP20.45■□□□□ 0.86
CGREF1-208ENST00000467539 TGS1Q96RS0 853 aaKnown RBP20.45■□□□□ 0.86
CGREF1-208ENST00000467539 FTHL17Q9BXU8 183 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 CDHR5Q9HBB8 845 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 PTPRSQ13332 1948 aa20.45■□□□□ 0.86
CGREF1-208ENST00000467539 EPOPA6NHQ4 379 aa20.44■□□□□ 0.86
CGREF1-208ENST00000467539 BTBD18B2RXH4 712 aa20.44■□□□□ 0.86
CGREF1-208ENST00000467539 PPP2R5CQ13362 524 aa20.44■□□□□ 0.86
CGREF1-208ENST00000467539 TRIM29Q14134 588 aa20.44■□□□□ 0.86
CGREF1-208ENST00000467539 UGCGQ16739 394 aa20.44■□□□□ 0.86
CGREF1-208ENST00000467539 ZNF710Q8N1W2 664 aa20.44■□□□□ 0.86
CGREF1-208ENST00000467539 METTL13Q8N6R0 699 aa20.44■□□□□ 0.86
CGREF1-208ENST00000467539 HAS1Q92839 578 aa20.44■□□□□ 0.86
CGREF1-208ENST00000467539 NIFKQ9BYG3 293 aaKnown RBP20.44■□□□□ 0.86
CGREF1-208ENST00000467539 MTCH2Q9Y6C9 303 aa20.44■□□□□ 0.86
CGREF1-208ENST00000467539 MYH9P35579 1960 aaKnown RBP20.43■□□□□ 0.86
CGREF1-208ENST00000467539 STBD1O95210 358 aa20.43■□□□□ 0.86
CGREF1-208ENST00000467539 TMOD1P28289 359 aa20.43■□□□□ 0.86
CGREF1-208ENST00000467539 CRYBB1P53674 252 aaPredicted RBP20.43■□□□□ 0.86
CGREF1-208ENST00000467539 PRKCEQ02156 737 aa20.43■□□□□ 0.86
CGREF1-208ENST00000467539 TARBP2Q15633 366 aaKnown RBP20.43■□□□□ 0.86
CGREF1-208ENST00000467539 XKR3Q5GH77 459 aa20.43■□□□□ 0.86
CGREF1-208ENST00000467539 EFCAB12Q6NXP0 572 aa20.43■□□□□ 0.86
CGREF1-208ENST00000467539 SPRED2Q7Z698 418 aa20.43■□□□□ 0.86
CGREF1-208ENST00000467539 CCDC83Q8IWF9 413 aa20.43■□□□□ 0.86
CGREF1-208ENST00000467539 LINC01465Q8N7H1 131 aa20.43■□□□□ 0.86
CGREF1-208ENST00000467539 IL27Q8NEV9 243 aa20.43■□□□□ 0.86
CGREF1-208ENST00000467539 SH2B1Q9NRF2 756 aaPredicted RBP20.43■□□□□ 0.86
CGREF1-208ENST00000467539 TRANK1O15050 2925 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 EYSQ5T1H1 3165 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 GPR32O75388 356 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 BAG4O95429 457 aaKnown RBP20.42■□□□□ 0.86
CGREF1-208ENST00000467539 ODR4Q5SWX8 454 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 DIS3L2Q8IYB7 885 aaKnown RBP20.42■□□□□ 0.86
CGREF1-208ENST00000467539 PPM1EQ8WY54 764 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 YME1L1Q96TA2 773 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 SUGCTQ9HAC7 445 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 LMCD1Q9NZU5 365 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 VAV3Q9UKW4 847 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 MICAL3Q7RTP6 2002 aa20.42■□□□□ 0.86
CGREF1-208ENST00000467539 FAM205CA6NFA0 338 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 EML1O00423 815 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 GTPBP6O43824 516 aaPredicted RBP20.41■□□□□ 0.86
CGREF1-208ENST00000467539 MARCH6O60337 910 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 LPXNO60711 386 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 RPS6KA5O75582 802 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 PSMC5P62195 406 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 PAK2Q13177 524 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 GRB10Q13322 594 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 CCDC85BQ15834 202 aaPredicted RBP20.41■□□□□ 0.86
CGREF1-208ENST00000467539 SLFN12Q8IYM2 578 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 CRIPAKQ8N1N5 446 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 SAMD11Q96NU1 681 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 TSPYL2Q9H2G4 693 aaPredicted RBP20.41■□□□□ 0.86
CGREF1-208ENST00000467539 GINS2Q9Y248 185 aa20.41■□□□□ 0.86
CGREF1-208ENST00000467539 NOC2LQ9Y3T9 749 aaKnown RBP20.41■□□□□ 0.86
CGREF1-208ENST00000467539 PRUNE2Q8WUY3 3088 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 DDX11L8A8MPP1 907 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 GPR182O15218 404 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 P4HBP07237 508 aaKnown RBP20.4■□□□□ 0.86
CGREF1-208ENST00000467539 RABEP1Q15276 862 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 EPHA7Q15375 998 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 KIZQ2M2Z5 673 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 CEP89Q96ST8 783 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 TMX1Q9H3N1 280 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 ERVK-5Q9HDB9 667 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 ST3GAL5Q9UNP4 418 aa20.4■□□□□ 0.86
CGREF1-208ENST00000467539 EVPLQ92817 2033 aa20.39■□□□□ 0.86
CGREF1-208ENST00000467539 DKC1O60832 514 aaKnown RBP eCLIP20.39■□□□□ 0.85
CGREF1-208ENST00000467539 VTNP04004 478 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 QARSP47897 775 aaKnown RBP20.39■□□□□ 0.85
CGREF1-208ENST00000467539 CLCN3P51790 818 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 NLRP11P59045 1033 aaKnown RBP20.39■□□□□ 0.85
CGREF1-208ENST00000467539 HMGN5P82970 282 aaKnown RBP20.39■□□□□ 0.85
CGREF1-208ENST00000467539 CDC42EP1Q00587 391 aa20.39■□□□□ 0.85
CGREF1-208ENST00000467539 TBC1D8BQ0IIM8 1120 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms