RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 PRR5-ARHGAP8B1AHC4 643 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 MGEA5O60502 916 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 CLASP2O75122 1294 aaKnown RBP11.84□□□□□ -0.51
HDAC3-203ENST00000467533 DCNP07585 359 aaKnown RBP11.84□□□□□ -0.51
HDAC3-203ENST00000467533 FGFR1P11362 822 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 PBX3P40426 434 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 HAND2P61296 217 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 ARHGAP8P85298 464 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 SEMA3FQ13275 785 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 ACAP1Q15027 740 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
HDAC3-203ENST00000467533 MARCH8Q5T0T0 291 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 KCNT2Q6UVM3 1135 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 TMEM87AQ8NBN3 555 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 ZNF558Q96NG5 402 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 INPP4AQ96PE3 977 aaPredicted RBP11.84□□□□□ -0.51
HDAC3-203ENST00000467533 RTKNQ9BST9 563 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 KCNK12Q9HB15 430 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 C1orf112Q9NSG2 853 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 PATJQ8NI35 1801 aa11.83□□□□□ -0.51
HDAC3-203ENST00000467533 SPATA31C2B4DYI2 1134 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 GCOM1H8Y6P7 765 aaPredicted RBP11.83□□□□□ -0.52
HDAC3-203ENST00000467533 STAM2O75886 525 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 PARP1P09874 1014 aaKnown RBP11.83□□□□□ -0.52
HDAC3-203ENST00000467533 POLR2MP0CAP2 368 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 MRPS9P82933 396 aaKnown RBP11.83□□□□□ -0.52
HDAC3-203ENST00000467533 DMWDQ09019 674 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 MFSD6Q6ZSS7 791 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 C1orf210Q8IVY1 113 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 SAMD3Q8N6K7 520 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 MRPL43Q8N983 215 aaKnown RBP11.83□□□□□ -0.52
HDAC3-203ENST00000467533 GLG1Q92896 1179 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 SECISBP2LQ93073 1101 aaKnown RBP11.83□□□□□ -0.52
HDAC3-203ENST00000467533 ADAM2Q99965 735 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 CELF4Q9BZC1 486 aaKnown RBP11.83□□□□□ -0.52
HDAC3-203ENST00000467533 ATP6V0A4Q9HBG4 840 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 RTEL1Q9NZ71 1219 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 WNT16Q9UBV4 365 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 DDX19BQ9UMR2 479 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 USP18Q9UMW8 372 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 MIA3Q5JRA6 1907 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 LAMA4Q16363 1823 aa11.83□□□□□ -0.52
HDAC3-203ENST00000467533 PPP1R11O60927 126 aaPredicted RBP11.82□□□□□ -0.52
HDAC3-203ENST00000467533 EPCAMP16422 314 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 KRT76Q01546 638 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 BMS1Q14692 1282 aaKnown RBP11.82□□□□□ -0.52
HDAC3-203ENST00000467533 ALX1Q15699 326 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 TMC5Q6UXY8 1006 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 SLC24A5Q71RS6 500 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 CABP7Q86V35 215 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 LRRC43Q8N309 656 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 ESR2Q92731 530 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 RGS18Q9NS28 235 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 SPG21Q9NZD8 308 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 IGSF9Q9P2J2 1179 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 GINS2Q9Y248 185 aa11.82□□□□□ -0.52
HDAC3-203ENST00000467533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-203ENST00000467533 POTEMA6NI47 508 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 RRN3P2A6NIE6 340 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 SPTLC1O15269 473 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 RPS6KA5O75582 802 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 FGAP02671 866 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 MS4A1P11836 297 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDAC3-203ENST00000467533 PPM1JQ5JR12 505 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 POTEGQ6S5H5 508 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 ABI1Q8IZP0 508 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
HDAC3-203ENST00000467533 FEZF2Q8TBJ5 459 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 TMEM117Q9H0C3 514 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 SFXN1Q9H9B4 322 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 TMEM161AQ9NX61 479 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 SIT1Q9Y3P8 196 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 NEDD4P46934 1319 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 FRMPD4Q14CM0 1322 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 TTC41PQ6P2S7 1318 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 KDM3AQ9Y4C1 1321 aa11.81□□□□□ -0.52
HDAC3-203ENST00000467533 C9IYK1 514 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 ZBTB5O15062 677 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 PCP11498 1178 aaKnown RBP11.8□□□□□ -0.52
HDAC3-203ENST00000467533 INSRRP14616 1297 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 KCNA4P22459 653 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 COL9A3Q14050 684 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-203ENST00000467533 ODR4Q5SWX8 454 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 LRRC55Q6ZSA7 311 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 NLRX1Q86UT6 975 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 IQCA1Q86XH1 822 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 TBC1D10CQ8IV04 446 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 TRAPPC12Q8WVT3 735 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 RSAD2Q8WXG1 361 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 SEPT1Q8WYJ6 367 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 SENP7Q9BQF6 1050 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 SMARCAD1Q9H4L7 1026 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 RNF41Q9H4P4 317 aaPredicted RBP11.8□□□□□ -0.52
HDAC3-203ENST00000467533 ARHGEF3Q9NR81 526 aa11.8□□□□□ -0.52
HDAC3-203ENST00000467533 SH2B1Q9NRF2 756 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms