RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 FKBP15Q5T1M5 1219 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 KRT79Q5XKE5 535 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 ZSCAN29Q8IWY8 852 aaPredicted RBP19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 CNKSR1Q969H4 720 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 MMRN2Q9H8L6 949 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 PSTPIP2Q9H939 334 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 ESYT2A0FGR8 921 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 A6NHS1 94 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 CCT8L1PA6NM43 557 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 USO1O60763 962 aaKnown RBP19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 PAEPP09466 180 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 FAM153BP0C7A2 387 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 CARSP49589 748 aaKnown RBP19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 TMEM266Q2M3C6 531 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 FAM153CQ494X1 144 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 TAF1DQ9H5J8 278 aaPredicted RBP19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 SLC5A4Q9NY91 659 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 FAM153AQ9UHL3 310 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 PLAAQ9Y263 795 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 E9PMD0 336 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 SMARCA1P28370 1054 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 BIRC3Q13489 604 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 PNMA8AQ86V59 439 aaPredicted RBP19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 IFT81Q8WYA0 676 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 TSC22D3Q99576 134 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 PAPOLBQ9NRJ5 636 aaKnown RBP19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 L3MBTL1Q9Y468 752 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 DDTLA6NHG4 134 aaPredicted RBP19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 STAT3P40763 770 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 FXR2P51116 673 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 CENPPQ6IPU0 288 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 RAD54LQ92698 747 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 ALS2CR12Q96Q35 445 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 NDST4Q9H3R1 872 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 RIC8AQ9NPQ8 531 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 SWAP70Q9UH65 585 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 RPS6KL1Q9Y6S9 549 aa19.66■□□□□ 0.74
SNAPC3-205ENST00000467062 ZNF263O14978 683 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 ONECUT3O60422 494 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 DIAPH2O60879 1101 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 LINGO3P0C6S8 592 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 RUFY4Q6ZNE9 571 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 ANKS4BQ8N8V4 417 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 MOV10L1Q9BXT6 1211 aaKnown RBP19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 MAGEF1Q9HAY2 307 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 EPB41L5Q9HCM4 733 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 PCDHA12Q9UN75 941 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 KLRG2A4D1S0 409 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 HSPA1LP34931 641 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 GCLCP48506 637 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 CCDC38Q502W7 563 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 UNC13DQ70J99 1090 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 C2CD5Q86YS7 1000 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 NELFCDQ8IXH7 590 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 PLCB1Q9NQ66 1216 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 ZFATQ9P243 1243 aa19.65■□□□□ 0.74
SNAPC3-205ENST00000467062 SPATA31A6Q5VVP1 1343 aa19.64■□□□□ 0.74
SNAPC3-205ENST00000467062 THSD7AQ9UPZ6 1657 aa19.64■□□□□ 0.74
SNAPC3-205ENST00000467062 CDK5RAP2Q96SN8 1893 aa19.64■□□□□ 0.74
SNAPC3-205ENST00000467062 ZBTB5O15062 677 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 GDF11O95390 407 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 EEF2P13639 858 aaKnown RBP19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 CCND1P24385 295 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 GUCY2FP51841 1108 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 MKRN4PQ13434 485 aaPredicted RBP19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 ZNF268Q14587 947 aaPredicted RBP19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 SPA17Q15506 151 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 COL23A1Q86Y22 540 aaPredicted RBP19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 TEX9Q8N6V9 391 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 CCDC197Q8NCU1 140 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 AGAP11Q8TF27 550 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 RAPGEF5Q92565 580 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 TEKT1Q969V4 418 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 PSMD1Q99460 953 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 TRPC5Q9UL62 973 aaPredicted RBP19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 MYH1P12882 1939 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 HEXIM1O94992 359 aaKnown RBP19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 LAMB3Q13751 1172 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 ODF2Q5BJF6 829 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 APLFQ8IW19 511 aaPredicted RBP19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 TANGO6Q9C0B7 1094 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 ZHX3Q9H4I2 956 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 KIAA1024Q9UPX6 916 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 PCDHA1Q9Y5I3 950 aa19.64■□□□□ 0.73
SNAPC3-205ENST00000467062 GLI1P08151 1106 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 ALADP13716 330 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 HSPA9P38646 679 aaKnown RBP19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 CRKP46108 304 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 PPP2R2AP63151 447 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 ZBED6P86452 979 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 GUCY2DQ02846 1103 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 QRICH1Q2TAL8 776 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 VWA3BQ502W6 1294 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 RBM12Q9NTZ6 932 aaKnown RBP19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 RGL1Q9NZL6 768 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 RNF14Q9UBS8 474 aa19.63■□□□□ 0.73
SNAPC3-205ENST00000467062 SLC12A4Q9UP95 1085 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms