RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 NDOR1Q9UHB4 597 aa4.74□□□□□ -1.65
GTF3C3-209ENST00000466862 SFMBT1Q9UHJ3 866 aa4.74□□□□□ -1.65
GTF3C3-209ENST00000466862 COQ6Q9Y2Z9 468 aa4.74□□□□□ -1.65
GTF3C3-209ENST00000466862 OVOL3O00110 214 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 EFCAB14O75071 495 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 CR2P20023 1033 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 DNM2P50570 870 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 CD83Q01151 205 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 HGFACQ04756 655 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 NOLC1Q14978 699 aaKnown RBP eCLIP4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 ZNF568Q3ZCX4 644 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 CATSPEREQ5SY80 951 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 MAMDC4Q6UXC1 1216 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 BRAPQ7Z569 592 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 FGD2Q7Z6J4 655 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 ADOQ96SZ5 270 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 PLA2G12BQ9BX93 195 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 KCNH7Q9NS40 1196 aa4.73□□□□□ -1.65
GTF3C3-209ENST00000466862 TCRBV16S1A1N1A0A5B0 115 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 SCDO00767 359 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 GSTA4O15217 222 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 FZD7O75084 574 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 AMHP03971 560 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 GTF2F1P35269 517 aaKnown RBP eCLIP4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 ECE1P42892 770 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 GDF5P43026 501 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 MECP2P51608 486 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 KCNQ1P51787 676 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 KLF10Q13118 480 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 PCOLCEQ15113 449 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 PRKD1Q15139 912 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 C2orf27AQ580R0 203 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 IGFL4Q6B9Z1 124 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 OTOP1Q7RTM1 612 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 POLNQ7Z5Q5 900 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 RTN4RL1Q86UN2 441 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 GIMAP8Q8ND71 665 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 MKL1Q969V6 931 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 ZNF503Q96F45 646 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 MRPL4Q9BYD3 311 aaKnown RBP4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 UCKL1Q9NWZ5 548 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 NR2E1Q9Y466 385 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 ASB1Q9Y576 335 aa4.72□□□□□ -1.65
GTF3C3-209ENST00000466862 A0A0G2JNJ9 132 aa4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 MOGSQ13724 837 aa4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 USP30Q70CQ3 517 aa4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 GPR135Q8IZ08 494 aa4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 FOXRED1Q96CU9 486 aaPredicted RBP4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 IPO9Q96P70 1041 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 OR14A2Q96R54 314 aa4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 DNAJC7Q99615 494 aa4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 NCOA5Q9HCD5 579 aaKnown RBP4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 Q9UFV3 132 aa4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 PTCH2Q9Y6C5 1203 aa4.71□□□□□ -1.66
GTF3C3-209ENST00000466862 PLSCR1O15162 318 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 FOXP2O15409 715 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 CDC14BO60729 498 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 ZBTB48P10074 688 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 ACO1P21399 889 aaKnown RBP4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 MRE11P49959 708 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 FOXE3Q13461 319 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 TMEM177Q53S58 311 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 HS1BP3Q53T59 392 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 ZFPM1Q8IX07 1006 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 ZNF808Q8N4W9 903 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 ZSWIM2Q8NEG5 633 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 THAP3Q8WTV1 239 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 OR10A2Q9H208 303 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 ING1Q9UK53 422 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 CDC42EP3Q9UKI2 254 aa4.7□□□□□ -1.66
GTF3C3-209ENST00000466862 PMS2P1A4D2B8 440 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 GOLGA6L22H0YM25 854 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 NPTXRO95502 500 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 ACRV1P26436 265 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 STAT5BP51692 787 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 ADAM8P78325 824 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 FOXL1Q12952 345 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 GRAMD4Q6IC98 578 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 OTOP2Q7RTS6 562 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 FILIP1Q7Z7B0 1213 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 IL17DQ8TAD2 202 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 CACTINQ8WUQ7 758 aaKnown RBP4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 GBP4Q96PP9 640 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 FOXB1Q99853 325 aa4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 AGO3Q9H9G7 860 aaKnown RBP4.69□□□□□ -1.66
GTF3C3-209ENST00000466862 CCDC163A0A0D9SF12 145 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 SLC12A8A0AV02 714 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 PRAMEF22A3QJZ6 481 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 DVL2O14641 736 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 PRLP01236 227 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 RPS19P39019 145 aaKnown RBP4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 IRF9Q00978 393 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 ALDH6A1Q02252 535 aaKnown RBP4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 SAFB2Q14151 953 aaKnown RBP eCLIP4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 USP39Q53GS9 565 aaKnown RBP4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 LILRB2Q8N423 598 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 IGSF22Q8N9C0 903 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 EXTL1Q92935 676 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 MAGEB10Q96LZ2 347 aaPredicted RBP4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 SRPK1Q96SB4 655 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms