RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 TMEM150BA6NC51 233 aa29.1■■■□□ 2.25
SMC4-206ENST00000465903 QARSP47897 775 aaKnown RBP29.1■■■□□ 2.25
SMC4-206ENST00000465903 MRPS6P82932 125 aaKnown RBP29.1■■■□□ 2.25
SMC4-206ENST00000465903 PLEKHG4Q58EX7 1191 aa29.1■■■□□ 2.25
SMC4-206ENST00000465903 NME8Q8N427 588 aa29.1■■■□□ 2.25
SMC4-206ENST00000465903 DBF4BQ8NFT6 615 aa29.1■■■□□ 2.25
SMC4-206ENST00000465903 RGL1Q9NZL6 768 aa29.1■■■□□ 2.25
SMC4-206ENST00000465903 PCDHB6Q9Y5E3 794 aa29.1■■■□□ 2.25
SMC4-206ENST00000465903 CDY2AQ9Y6F7 541 aa29.1■■■□□ 2.25
SMC4-206ENST00000465903 SLC4A7Q9Y6M7 1214 aa29.1■■■□□ 2.25
SMC4-206ENST00000465903 ZBBXA8MT70 800 aa29.09■■■□□ 2.25
SMC4-206ENST00000465903 RPLP2P05387 115 aaKnown RBP29.09■■■□□ 2.25
SMC4-206ENST00000465903 GPR153Q6NV75 609 aa29.09■■■□□ 2.25
SMC4-206ENST00000465903 LINC01465Q8N7H1 131 aa29.09■■■□□ 2.25
SMC4-206ENST00000465903 DYDC2Q96IM9 177 aa29.09■■■□□ 2.25
SMC4-206ENST00000465903 BAIAP3O94812 1187 aa29.08■■■□□ 2.25
SMC4-206ENST00000465903 OR52Z1P0C646 297 aa29.08■■■□□ 2.25
SMC4-206ENST00000465903 TMEM62Q0P6H9 643 aa29.08■■■□□ 2.25
SMC4-206ENST00000465903 ANO5Q75V66 913 aa29.08■■■□□ 2.25
SMC4-206ENST00000465903 SEPT9Q9UHD8 586 aaPredicted RBP29.08■■■□□ 2.25
SMC4-206ENST00000465903 ARID2Q68CP9 1835 aa29.08■■■□□ 2.25
SMC4-206ENST00000465903 DDX11L8A8MPP1 907 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 MAGEB2O15479 319 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 SLITRK3O94933 977 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 MKRN4PQ13434 485 aaPredicted RBP29.07■■■□□ 2.24
SMC4-206ENST00000465903 CTTNQ14247 550 aaKnown RBP29.07■■■□□ 2.24
SMC4-206ENST00000465903 MTERF2Q49AM1 385 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 IER5Q5VY09 327 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 C4orf19Q8IY42 314 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 HSD17B14Q9BPX1 270 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 EIF2AK1Q9BQI3 630 aaKnown RBP29.07■■■□□ 2.24
SMC4-206ENST00000465903 SH2D3AQ9BRG2 576 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 FOXD4L1Q9NU39 408 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 TRPV2Q9Y5S1 764 aa29.07■■■□□ 2.24
SMC4-206ENST00000465903 POTEMA6NI47 508 aa29.06■■■□□ 2.24
SMC4-206ENST00000465903 DKC1O60832 514 aaKnown RBP eCLIP29.06■■■□□ 2.24
SMC4-206ENST00000465903 LPIN1Q14693 890 aa29.06■■■□□ 2.24
SMC4-206ENST00000465903 FBXO47Q5MNV8 452 aa29.06■■■□□ 2.24
SMC4-206ENST00000465903 EFCAB12Q6NXP0 572 aa29.06■■■□□ 2.24
SMC4-206ENST00000465903 LXNQ9BS40 222 aa29.06■■■□□ 2.24
SMC4-206ENST00000465903 CELF4Q9BZC1 486 aaKnown RBP29.06■■■□□ 2.24
SMC4-206ENST00000465903 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.06■■■□□ 2.24
SMC4-206ENST00000465903 KDM3AQ9Y4C1 1321 aa29.05■■■□□ 2.24
SMC4-206ENST00000465903 ABHD14A-ACY1A0A1B0GW23 586 aa29.05■■■□□ 2.24
SMC4-206ENST00000465903 GHRP10912 638 aa29.05■■■□□ 2.24
SMC4-206ENST00000465903 TECP42680 631 aa29.05■■■□□ 2.24
SMC4-206ENST00000465903 WDR5P61964 334 aaKnown RBP29.05■■■□□ 2.24
SMC4-206ENST00000465903 CYP4A11Q02928 519 aa29.05■■■□□ 2.24
SMC4-206ENST00000465903 IKBKEQ14164 716 aa29.05■■■□□ 2.24
SMC4-206ENST00000465903 CDHR5Q9HBB8 845 aa29.05■■■□□ 2.24
SMC4-206ENST00000465903 PBX2P40425 430 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 CLCN3P51790 818 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 PTGDRQ13258 359 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 RILPL1Q5EBL4 403 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 PLA2G4FQ68DD2 849 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 LRRC71Q8N4P6 559 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 METTL13Q8N6R0 699 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 ZNF579Q8NAF0 562 aaKnown RBP29.04■■■□□ 2.24
SMC4-206ENST00000465903 SEPT8Q92599 483 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 PBX4Q9BYU1 374 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 ZSWIM4Q9H7M6 989 aa29.04■■■□□ 2.24
SMC4-206ENST00000465903 AGO3Q9H9G7 860 aaKnown RBP29.04■■■□□ 2.24
SMC4-206ENST00000465903 IGKV6-21A0A0C4DH24 114 aa29.03■■■□□ 2.24
SMC4-206ENST00000465903 ZBTB39O15060 712 aa29.03■■■□□ 2.24
SMC4-206ENST00000465903 SYT1P21579 422 aa29.03■■■□□ 2.24
SMC4-206ENST00000465903 TPH2Q8IWU9 490 aa29.03■■■□□ 2.24
SMC4-206ENST00000465903 PHOSPHO2Q8TCD6 241 aa29.03■■■□□ 2.24
SMC4-206ENST00000465903 SLC9A7Q96T83 725 aa29.03■■■□□ 2.24
SMC4-206ENST00000465903 CYP26B1Q9NR63 512 aa29.03■■■□□ 2.24
SMC4-206ENST00000465903 SQORQ9Y6N5 450 aa29.03■■■□□ 2.24
SMC4-206ENST00000465903 MYO9BQ13459 2157 aa29.03■■■□□ 2.24
SMC4-206ENST00000465903 VTNP04004 478 aa29.02■■■□□ 2.24
SMC4-206ENST00000465903 ATP2A2P16615 1042 aaKnown RBP29.02■■■□□ 2.24
SMC4-206ENST00000465903 PDCP20941 246 aa29.02■■■□□ 2.24
SMC4-206ENST00000465903 NPEPPSP55786 919 aa29.02■■■□□ 2.24
SMC4-206ENST00000465903 DEFB103AP81534 67 aa29.02■■■□□ 2.24
SMC4-206ENST00000465903 TBC1D8BQ0IIM8 1120 aa29.02■■■□□ 2.24
SMC4-206ENST00000465903 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.02■■■□□ 2.24
SMC4-206ENST00000465903 Q7L0L9 218 aa29.02■■■□□ 2.24
SMC4-206ENST00000465903 NEK9Q8TD19 979 aa29.02■■■□□ 2.24
SMC4-206ENST00000465903 IFIH1Q9BYX4 1025 aaKnown RBP29.02■■■□□ 2.24
SMC4-206ENST00000465903 SUGCTQ9HAC7 445 aa29.02■■■□□ 2.24
SMC4-206ENST00000465903 M0QZ92 97 aa29.01■■■□□ 2.23
SMC4-206ENST00000465903 GPR32O75388 356 aa29.01■■■□□ 2.23
SMC4-206ENST00000465903 MAFO75444 373 aaPredicted RBP29.01■■■□□ 2.23
SMC4-206ENST00000465903 LYPLA2O95372 231 aa29.01■■■□□ 2.23
SMC4-206ENST00000465903 SPATA31C1P0DKV0 1188 aa29.01■■■□□ 2.23
SMC4-206ENST00000465903 DNAJB2P25686 324 aa29.01■■■□□ 2.23
SMC4-206ENST00000465903 YWHABP31946 246 aaKnown RBP29.01■■■□□ 2.23
SMC4-206ENST00000465903 RABGGTBP53611 331 aa29.01■■■□□ 2.23
SMC4-206ENST00000465903 DRP2Q13474 957 aa29.01■■■□□ 2.23
SMC4-206ENST00000465903 TSHZ1Q6ZSZ6 1077 aa29.01■■■□□ 2.23
SMC4-206ENST00000465903 HSCBQ8IWL3 235 aa29.01■■■□□ 2.23
SMC4-206ENST00000465903 VPS37CA5D8V6 355 aaPredicted RBP29■■■□□ 2.23
SMC4-206ENST00000465903 EFCAB14O75071 495 aa29■■■□□ 2.23
SMC4-206ENST00000465903 FXR2P51116 673 aaKnown RBP eCLIP29■■■□□ 2.233e-10■□□□□ 11
SMC4-206ENST00000465903 IL17AQ16552 155 aa29■■■□□ 2.23
SMC4-206ENST00000465903 APBB2Q92870 758 aa29■■■□□ 2.23
SMC4-206ENST00000465903 YBX2Q9Y2T7 364 aaKnown RBP29■■■□□ 2.23
SMC4-206ENST00000465903 MED24O75448 989 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms