RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PBX4Q9BYU1 374 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 OSBPL7Q9BZF2 842 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 TMEM60Q9H2L4 133 aa14.5□□□□□ -0.09
COL5A1-206ENST00000465877 NOL7Q9UMY1 257 aaKnown RBP14.5□□□□□ -0.09
COL5A1-206ENST00000465877 TMEM150BA6NC51 233 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 H3BQV1 296 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 M0QZ92 97 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 GHRP10912 638 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 ATP2A2P16615 1042 aaKnown RBP14.49□□□□□ -0.09
COL5A1-206ENST00000465877 KLRC1P26715 233 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 PBX2P40425 430 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 KCNJ6P48051 423 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 PSMC5P62195 406 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 NBR1Q14596 966 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 Q7L0L9 218 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 DBF4BQ8NFT6 615 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 MTMR9Q96QG7 549 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 IFIH1Q9BYX4 1025 aaKnown RBP14.49□□□□□ -0.09
COL5A1-206ENST00000465877 TTC12Q9H892 705 aaPredicted RBP14.49□□□□□ -0.09
COL5A1-206ENST00000465877 TRPV2Q9Y5S1 764 aa14.49□□□□□ -0.09
COL5A1-206ENST00000465877 TMEM265A0A087WTH1 108 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 POTEMA6NI47 508 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 K7ELQ4 463 aaPredicted RBP14.48□□□□□ -0.09
COL5A1-206ENST00000465877 DKC1O60832 514 aaKnown RBP eCLIP14.48□□□□□ -0.09
COL5A1-206ENST00000465877 EFCAB14O75071 495 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 P4HBP07237 508 aaKnown RBP14.48□□□□□ -0.09
COL5A1-206ENST00000465877 OR52Z1P0C646 297 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 TXKP42681 527 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 QARSP47897 775 aaKnown RBP14.48□□□□□ -0.09
COL5A1-206ENST00000465877 CLCN3P51790 818 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 DEFB103AP81534 67 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 MKRN4PQ13434 485 aaPredicted RBP14.48□□□□□ -0.09
COL5A1-206ENST00000465877 LPIN1Q14693 890 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 EPHA7Q15375 998 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 RAB30Q15771 203 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 MTERF2Q49AM1 385 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 XKR3Q5GH77 459 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 FBXO47Q5MNV8 452 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 IER5Q5VY09 327 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 MCTP1Q6DN14 999 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 TSHZ1Q6ZSZ6 1077 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 DEFB123Q8N688 67 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 SEPT8Q92599 483 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 APBB2Q92870 758 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 NRBP2Q9NSY0 501 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 WRAP73Q9P2S5 460 aaPredicted RBP14.48□□□□□ -0.09
COL5A1-206ENST00000465877 PCDHA12Q9UN75 941 aa14.48□□□□□ -0.09
COL5A1-206ENST00000465877 KDM3AQ9Y4C1 1321 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 ABHD14A-ACY1A0A1B0GW23 586 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 STBD1O95210 358 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 CYP4A11Q02928 519 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 TBC1D8BQ0IIM8 1120 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 IKBKEQ14164 716 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 TARBP2Q15633 366 aaKnown RBP14.47□□□□□ -0.09
COL5A1-206ENST00000465877 ZNF174Q15697 407 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 PLA2G4FQ68DD2 849 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 ANO5Q75V66 913 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 LRRC71Q8N4P6 559 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 METTL13Q8N6R0 699 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 LINC01465Q8N7H1 131 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 NEK9Q8TD19 979 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 TIFAQ96CG3 184 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 DYDC2Q96IM9 177 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 MAP7D2Q96T17 732 aa14.47□□□□□ -0.09
COL5A1-206ENST00000465877 TTC3P53804 2025 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 MAGEB2O15479 319 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 VTNP04004 478 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 TOB1P50616 345 aaPredicted RBP14.46□□□□□ -0.09
COL5A1-206ENST00000465877 RABGGTBP53611 331 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 HERC6Q8IVU3 1022 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 KIAA0319LQ8IZA0 1049 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 NME8Q8N427 588 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 PHOSPHO2Q8TCD6 241 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 FAM161BQ96MY7 647 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 CEP89Q96ST8 783 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 PPP1R16BQ96T49 567 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 EIF2AK1Q9BQI3 630 aaKnown RBP14.46□□□□□ -0.09
COL5A1-206ENST00000465877 SH2D3AQ9BRG2 576 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 NIFKQ9BYG3 293 aaKnown RBP14.46□□□□□ -0.09
COL5A1-206ENST00000465877 CELF4Q9BZC1 486 aaKnown RBP14.46□□□□□ -0.09
COL5A1-206ENST00000465877 TTYH1Q9H313 450 aaPredicted RBP14.46□□□□□ -0.09
COL5A1-206ENST00000465877 RGL1Q9NZL6 768 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 YBX2Q9Y2T7 364 aaKnown RBP14.46□□□□□ -0.09
COL5A1-206ENST00000465877 PCDHB6Q9Y5E3 794 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 REV3LO60673 3130 aa14.46□□□□□ -0.09
COL5A1-206ENST00000465877 ATG2AQ2TAZ0 1938 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 VPS37CA5D8V6 355 aaPredicted RBP14.45□□□□□ -0.1
COL5A1-206ENST00000465877 YWHABP31946 246 aaKnown RBP14.45□□□□□ -0.1
COL5A1-206ENST00000465877 PAK2Q13177 524 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 CTTNQ14247 550 aaKnown RBP14.45□□□□□ -0.1
COL5A1-206ENST00000465877 FNDC1Q4ZHG4 1894 aaPredicted RBP14.45□□□□□ -0.1
COL5A1-206ENST00000465877 LARP1BQ659C4 914 aaKnown RBP14.45□□□□□ -0.1
COL5A1-206ENST00000465877 EFCAB12Q6NXP0 572 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 TMCO2Q7Z6W1 182 aaPredicted RBP14.45□□□□□ -0.1
COL5A1-206ENST00000465877 HSCBQ8IWL3 235 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 C4orf19Q8IY42 314 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 MYOCDQ8IZQ8 938 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 USP38Q8NB14 1042 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 SNX21Q969T3 373 aa14.45□□□□□ -0.1
COL5A1-206ENST00000465877 INTS4Q96HW7 963 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms