RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 CYP4F22Q6NT55 531 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 LCNL1Q6ZST4 164 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 LILRA2Q8N149 483 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 OXR1Q8N573 874 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 ZNF384Q8TF68 577 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 DCPSQ96C86 337 aaKnown RBP5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 CDCA5Q96FF9 252 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 LRRC3Q9BY71 257 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 BRMS1Q9HCU9 246 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 ZBTB40Q9NUA8 1239 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 ABT1Q9ULW3 272 aaKnown RBP5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 MYO3BQ8WXR4 1341 aa5.92□□□□□ -1.46
EXOSC3-204ENST00000465860 LAMB1P07942 1786 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 DOCK2Q92608 1830 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 FITM1A5D6W6 292 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 ETV2O00321 342 aaPredicted RBP5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 GREM1O60565 184 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 UBOX5O94941 541 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 TMEM253P0C7T8 217 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 EIF4A3P38919 411 aaKnown RBP5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 CACNB3P54284 484 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 FKBP1AP62942 108 aaKnown RBP5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 GRM1Q13255 1194 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 RASGRF1Q13972 1273 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 NR0B2Q15466 257 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 CLEC16AQ2KHT3 1053 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 DEFB115Q30KQ5 88 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 CAVIN4Q5BKX8 364 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 ARSHQ5FYA8 562 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 ATG14Q6ZNE5 492 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 VPS37DQ86XT2 251 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 ZSCAN18Q8TBC5 510 aaPredicted RBP5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 DHX38Q92620 1227 aaKnown RBP5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 TDRD3Q9H7E2 651 aaKnown RBP5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 EXOC6BQ9Y2D4 811 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 NOP58Q9Y2X3 529 aaKnown RBP5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 ZNF281Q9Y2X9 895 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 PCDHB14Q9Y5E9 798 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 WDR33Q9C0J8 1336 aaKnown RBP5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 AK9Q5TCS8 1911 aa5.91□□□□□ -1.46
EXOSC3-204ENST00000465860 SIPA1L1O43166 1804 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 FOCADQ5VW36 1801 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 CASP8AP2Q9UKL3 1982 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 NPIPB6E9PJ23 425 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 FRAT2O75474 233 aaPredicted RBP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 SURF6O75683 361 aaKnown RBP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 MED14OSP0DP75 135 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 MCAMP43121 646 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 CRKP46108 304 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 RBM5P52756 815 aaKnown RBP eCLIP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 HUNKP57058 714 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 G3BP1Q13283 466 aaKnown RBP eCLIP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 NMIQ13287 307 aaPredicted RBP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 PRKG1Q13976 671 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 DLGAP5Q15398 846 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 TNNI3KQ59H18 835 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 NBPF12Q5TAG4 269 aaPredicted RBP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 APOBEC3HQ6NTF7 200 aaKnown RBP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 EAF2Q96CJ1 260 aaPredicted RBP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 CAPNS2Q96L46 248 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 NEUROD6Q96NK8 337 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 GBA2Q9HCG7 927 aaPredicted RBP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 CD320Q9NPF0 282 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 HMG20BQ9P0W2 317 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 ZNF70Q9UC06 446 aaPredicted RBP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 SUPT16HQ9Y5B9 1047 aaKnown RBP5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 FPGT-TNNI3KV9GXZ4 949 aa5.9□□□□□ -1.46
EXOSC3-204ENST00000465860 MAST2Q6P0Q8 1798 aa5.9□□□□□ -1.47
EXOSC3-204ENST00000465860 TCP10L2B9ZVM9 353 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 UBE2Q2LH0YL09 131 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 FOXN1O15353 648 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 ATE1O95260 518 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 HSPA1AP0DMV8 641 aaKnown RBP5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 HSPA1BP0DMV9 641 aaKnown RBP5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 RAG1P15918 1043 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 POLR2BP30876 1174 aaKnown RBP5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 RRP1P56182 461 aaKnown RBP5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 MRPL58Q14197 206 aaKnown RBP5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 OVOS1Q6IE37 1185 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 ZFPM1Q8IX07 1006 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 SYTL5Q8TDW5 730 aaPredicted RBP5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 ZNF296Q8WUU4 475 aaPredicted RBP5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 LINC01599Q8WXQ3 324 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 KCNN1Q92952 543 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 CLMNQ96JQ2 1002 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 TEPSINQ96N21 525 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 G6PC3Q9BUM1 346 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 HDAC8Q9BY41 377 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 TMEM39BQ9GZU3 492 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 CCDC8Q9H0W5 538 aaPredicted RBP5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 DEFB129Q9H1M3 183 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 VEZTQ9HBM0 779 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 IL1RAPL2Q9NP60 686 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 GMIPQ9P107 970 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 DBNLQ9UJU6 430 aaKnown RBP5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 HDAC9Q9UKV0 1011 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 HDAC5Q9UQL6 1122 aa5.89□□□□□ -1.47
EXOSC3-204ENST00000465860 MYH7P12883 1935 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 TCAF2A6NFQ2 919 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 SMARCA5O60264 1052 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms