RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 KIAA0319LQ8IZA0 1049 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 LINC01599Q8WXQ3 324 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 BBXQ8WY36 941 aaPredicted RBP24.61■■□□□ 1.53
LIME1-203ENST00000465591 CELF4Q9BZC1 486 aaKnown RBP24.61■■□□□ 1.53
LIME1-203ENST00000465591 MTUS1Q9ULD2 1270 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 INSL6Q9Y581 213 aa24.61■■□□□ 1.53
LIME1-203ENST00000465591 GRB10Q13322 594 aa24.6■■□□□ 1.53
LIME1-203ENST00000465591 LETM2Q2VYF4 491 aa24.6■■□□□ 1.53
LIME1-203ENST00000465591 SP7Q8TDD2 431 aaPredicted RBP24.6■■□□□ 1.53
LIME1-203ENST00000465591 KIF2CQ99661 725 aa24.6■■□□□ 1.53
LIME1-203ENST00000465591 CDHR5Q9HBB8 845 aa24.6■■□□□ 1.53
LIME1-203ENST00000465591 DDX25Q9UHL0 483 aaKnown RBP24.6■■□□□ 1.53
LIME1-203ENST00000465591 MTCH2Q9Y6C9 303 aa24.6■■□□□ 1.53
LIME1-203ENST00000465591 NLRC5Q86WI3 1866 aa24.6■■□□□ 1.53
LIME1-203ENST00000465591 CCDC194A0A1B0GVG4 234 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 DLL1O00548 723 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 ENPP3O14638 875 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 RPLP2P05387 115 aaKnown RBP24.59■■□□□ 1.53
LIME1-203ENST00000465591 XBP1P17861 261 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 ERVK-21P61565 698 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 NR5A1Q13285 461 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 PIK3AP1Q6ZUJ8 805 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 RTN4RL1Q86UN2 441 aaPredicted RBP24.59■■□□□ 1.53
LIME1-203ENST00000465591 MICALL1Q8N3F8 863 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 GDPD5Q8WTR4 605 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 KDM3AQ9Y4C1 1321 aa24.59■■□□□ 1.53
LIME1-203ENST00000465591 POU3F3P20264 500 aaPredicted RBP24.58■■□□□ 1.53
LIME1-203ENST00000465591 JAK3P52333 1124 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 FOSBP53539 338 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 PRKCEQ02156 737 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 NEK8Q86SG6 692 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 NME8Q8N427 588 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 TMEM40Q8WWA1 233 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 TNFRSF25Q93038 417 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 TGS1Q96RS0 853 aaKnown RBP24.58■■□□□ 1.53
LIME1-203ENST00000465591 C17orf80Q9BSJ5 609 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 SUGCTQ9HAC7 445 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 PADI3Q9ULW8 664 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 SQORQ9Y6N5 450 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 COL4A6Q14031 1691 aa24.58■■□□□ 1.53
LIME1-203ENST00000465591 VCANP13611 3396 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 M0QZ92 97 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 OATP04181 439 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 SFNP31947 248 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 TMEM266Q2M3C6 531 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 MIER3Q7Z3K6 550 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 WASF1Q92558 559 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 PPP1R16BQ96T49 567 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 YME1L1Q96TA2 773 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 GINS2Q9Y248 185 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 BRWD1Q9NSI6 2320 aa24.57■■□□□ 1.52
LIME1-203ENST00000465591 LINC01465Q8N7H1 131 aa24.56■■□□□ 1.52
LIME1-203ENST00000465591 FAM167AQ96KS9 214 aa24.56■■□□□ 1.52
LIME1-203ENST00000465591 COL25A1Q9BXS0 654 aaPredicted RBP24.56■■□□□ 1.52
LIME1-203ENST00000465591 TMX1Q9H3N1 280 aa24.56■■□□□ 1.52
LIME1-203ENST00000465591 KCNMB3Q9NPA1 279 aa24.56■■□□□ 1.52
LIME1-203ENST00000465591 TTC28Q96AY4 2481 aa24.56■■□□□ 1.52
LIME1-203ENST00000465591 TMEM150BA6NC51 233 aa24.55■■□□□ 1.52
LIME1-203ENST00000465591 EML1O00423 815 aa24.55■■□□□ 1.52
LIME1-203ENST00000465591 STBD1O95210 358 aa24.55■■□□□ 1.52
LIME1-203ENST00000465591 VTNP04004 478 aa24.55■■□□□ 1.52
LIME1-203ENST00000465591 CLCN3P51790 818 aa24.55■■□□□ 1.52
LIME1-203ENST00000465591 PPP4R3AQ6IN85 833 aa24.55■■□□□ 1.52
LIME1-203ENST00000465591 METTL13Q8N6R0 699 aa24.55■■□□□ 1.52
LIME1-203ENST00000465591 RDM1Q8NG50 284 aa24.55■■□□□ 1.52
LIME1-203ENST00000465591 VAV3Q9UKW4 847 aa24.55■■□□□ 1.52
LIME1-203ENST00000465591 NOC2LQ9Y3T9 749 aaKnown RBP24.55■■□□□ 1.52
LIME1-203ENST00000465591 MYO7AQ13402 2215 aa24.54■■□□□ 1.52
LIME1-203ENST00000465591 CCNT1O60563 726 aaKnown RBP24.54■■□□□ 1.52
LIME1-203ENST00000465591 KRT2P35908 639 aa24.54■■□□□ 1.52
LIME1-203ENST00000465591 PAK2Q13177 524 aa24.54■■□□□ 1.52
LIME1-203ENST00000465591 KIZQ2M2Z5 673 aa24.54■■□□□ 1.52
LIME1-203ENST00000465591 LRRC71Q8N4P6 559 aa24.54■■□□□ 1.52
LIME1-203ENST00000465591 HAS1Q92839 578 aa24.54■■□□□ 1.52
LIME1-203ENST00000465591 RC3H2Q9HBD1 1191 aaKnown RBP24.54■■□□□ 1.52
LIME1-203ENST00000465591 ERVK-5Q9HDB9 667 aa24.54■■□□□ 1.52
LIME1-203ENST00000465591 CEP131Q9UPN4 1083 aa24.54■■□□□ 1.52
LIME1-203ENST00000465591 SPTBN5Q9NRC6 3674 aaKnown RBP24.54■■□□□ 1.52
LIME1-203ENST00000465591 RALGAPA2Q2PPJ7 1873 aa24.53■■□□□ 1.52
LIME1-203ENST00000465591 GTPBP6O43824 516 aaPredicted RBP24.53■■□□□ 1.52
LIME1-203ENST00000465591 GPR32O75388 356 aa24.53■■□□□ 1.52
LIME1-203ENST00000465591 TARBP2Q15633 366 aaKnown RBP24.53■■□□□ 1.52
LIME1-203ENST00000465591 POTEDQ86YR6 584 aa24.53■■□□□ 1.52
LIME1-203ENST00000465591 CCDC83Q8IWF9 413 aa24.53■■□□□ 1.52
LIME1-203ENST00000465591 CRIPAKQ8N1N5 446 aa24.53■■□□□ 1.52
LIME1-203ENST00000465591 OSMRQ99650 979 aa24.53■■□□□ 1.52
LIME1-203ENST00000465591 NRBP2Q9NSY0 501 aa24.53■■□□□ 1.52
LIME1-203ENST00000465591 LIMCH1Q9UPQ0 1083 aa24.53■■□□□ 1.52
LIME1-203ENST00000465591 BTBD18B2RXH4 712 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 WNT7AO00755 349 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 MAGEB2O15479 319 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 MGEA5O60502 916 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 MMP1P03956 469 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 LINC00271P0C7V0 271 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 GCFC2P16383 781 aaKnown RBP24.52■■□□□ 1.52
LIME1-203ENST00000465591 EFCAB12Q6NXP0 572 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 BANK1Q8NDB2 785 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 CEP89Q96ST8 783 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 SH2D3AQ9BRG2 576 aa24.52■■□□□ 1.52
LIME1-203ENST00000465591 TSPYL2Q9H2G4 693 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms