RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 SFNP31947 248 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 PRKCEQ02156 737 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 TAP1Q03518 808 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 MGAT3Q09327 533 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 ST3GAL1Q11201 340 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 UGCGQ16739 394 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 FBXO47Q5MNV8 452 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 KRT40Q6A162 431 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 DIS3L2Q8IYB7 885 aaKnown RBP13.74□□□□□ -0.21
XRN1-204ENST00000465074 FAM184AQ8NB25 1140 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 FAM167AQ96KS9 214 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 ZSCAN31Q96LW9 406 aaPredicted RBP13.74□□□□□ -0.21
XRN1-204ENST00000465074 RAD9AQ99638 391 aa13.74□□□□□ -0.21
XRN1-204ENST00000465074 CELF4Q9BZC1 486 aaKnown RBP13.74□□□□□ -0.21
XRN1-204ENST00000465074 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
XRN1-204ENST00000465074 SMIM35A0A1B0GVV1 85 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 DDX11L8A8MPP1 907 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 ZNF862O60290 1169 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 ARHGEF15O94989 841 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 GJB5O95377 273 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 BAG4O95429 457 aaKnown RBP13.73□□□□□ -0.21
XRN1-204ENST00000465074 VTNP04004 478 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 OATP04181 439 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 GCFC2P16383 781 aaKnown RBP13.73□□□□□ -0.21
XRN1-204ENST00000465074 NFX1Q12986 1120 aaKnown RBP13.73□□□□□ -0.21
XRN1-204ENST00000465074 GNL2Q13823 731 aaKnown RBP13.73□□□□□ -0.21
XRN1-204ENST00000465074 SAFBQ15424 915 aaKnown RBP eCLIP13.73□□□□□ -0.21
XRN1-204ENST00000465074 TMEM266Q2M3C6 531 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 SPRED2Q7Z698 418 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 RPAINQ86UA6 219 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 LRRC71Q8N4P6 559 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 BANK1Q8NDB2 785 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 ETNPPLQ8TBG4 499 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 APBB2Q92870 758 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 C8orf76Q96K31 380 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 ZNF668Q96K58 619 aaPredicted RBP13.73□□□□□ -0.21
XRN1-204ENST00000465074 YME1L1Q96TA2 773 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 SH2D3AQ9BRG2 576 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
XRN1-204ENST00000465074 SUGCTQ9HAC7 445 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 CDHR5Q9HBB8 845 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 CEP131Q9UPN4 1083 aa13.73□□□□□ -0.21
XRN1-204ENST00000465074 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.72□□□□□ -0.21
XRN1-204ENST00000465074 TMEM150BA6NC51 233 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 ZBTB42B2RXF5 422 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 RPLP2P05387 115 aaKnown RBP13.72□□□□□ -0.21
XRN1-204ENST00000465074 RBM25P49756 843 aaKnown RBP13.72□□□□□ -0.21
XRN1-204ENST00000465074 CLCN3P51790 818 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 PAK2Q13177 524 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 ADGRE1Q14246 886 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 KIZQ2M2Z5 673 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 MTERF2Q49AM1 385 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 NCAPH2Q6IBW4 605 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 PPP4R3AQ6IN85 833 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 EFCAB12Q6NXP0 572 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 TSHZ1Q6ZSZ6 1077 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 KIAA0319LQ8IZA0 1049 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 NME8Q8N427 588 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 MBOAT7Q96N66 472 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 SCLT1Q96NL6 688 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 NAP1L4Q99733 375 aaKnown RBP13.72□□□□□ -0.21
XRN1-204ENST00000465074 SH2B1Q9NRF2 756 aaPredicted RBP13.72□□□□□ -0.21
XRN1-204ENST00000465074 AKT3Q9Y243 479 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 INSL6Q9Y581 213 aa13.72□□□□□ -0.21
XRN1-204ENST00000465074 IGSF9BQ9UPX0 1349 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 EML1O00423 815 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 ENPP3O14638 875 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 ST18O60284 1047 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 C22orf31O95567 290 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 TBC1D8BQ0IIM8 1120 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 RABEP1Q15276 862 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 FAM20AQ96MK3 541 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 MAP7D2Q96T17 732 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 LLPHQ9BRT6 129 aaKnown RBP13.71□□□□□ -0.21
XRN1-204ENST00000465074 PADI3Q9ULW8 664 aa13.71□□□□□ -0.21
XRN1-204ENST00000465074 CDH23Q9H251 3354 aa13.71□□□□□ -0.22
XRN1-204ENST00000465074 EYSQ5T1H1 3165 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 EPOPA6NHQ4 379 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 MAGEB2O15479 319 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
XRN1-204ENST00000465074 RPS6KA5O75582 802 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 TMOD1P28289 359 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 SKIV2LQ15477 1246 aaKnown RBP13.7□□□□□ -0.22
XRN1-204ENST00000465074 CALCRLQ16602 461 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 USP38Q8NB14 1042 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 RDM1Q8NG50 284 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 TNFRSF25Q93038 417 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 TOP1MTQ969P6 601 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 OSMRQ99650 979 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 KCNMB3Q9NPA1 279 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 NOC2LQ9Y3T9 749 aaKnown RBP13.7□□□□□ -0.22
XRN1-204ENST00000465074 CHD7Q9P2D1 2997 aa13.7□□□□□ -0.22
XRN1-204ENST00000465074 LINC01553A4QN01 128 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 MCM7P33993 719 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 TXKP42681 527 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
XRN1-204ENST00000465074 PSMC5P62195 406 aa13.69□□□□□ -0.22
XRN1-204ENST00000465074 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
XRN1-204ENST00000465074 CYP4A11Q02928 519 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms