RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 C22orf31O95567 290 aa19.12■□□□□ 0.65
VPS52-215ENST00000464425 QARSP47897 775 aaKnown RBP19.12■□□□□ 0.65
VPS52-215ENST00000464425 TRAPPC10P48553 1259 aa19.12■□□□□ 0.65
VPS52-215ENST00000464425 TOB1P50616 345 aaPredicted RBP19.12■□□□□ 0.65
VPS52-215ENST00000464425 MRPS6P82932 125 aaKnown RBP19.12■□□□□ 0.65
VPS52-215ENST00000464425 MGAT3Q09327 533 aa19.12■□□□□ 0.65
VPS52-215ENST00000464425 XKR3Q5GH77 459 aa19.12■□□□□ 0.65
VPS52-215ENST00000464425 KIAA0319LQ8IZA0 1049 aa19.12■□□□□ 0.65
VPS52-215ENST00000464425 SH2D3AQ9BRG2 576 aa19.12■□□□□ 0.65
VPS52-215ENST00000464425 RGL1Q9NZL6 768 aa19.12■□□□□ 0.65
VPS52-215ENST00000464425 STX6O43752 255 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 P4HBP07237 508 aaKnown RBP19.11■□□□□ 0.65
VPS52-215ENST00000464425 GHRP10912 638 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 PBX2P40425 430 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 CYP4A11Q02928 519 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 IKBKEQ14164 716 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 CTTNQ14247 550 aaKnown RBP19.11■□□□□ 0.65
VPS52-215ENST00000464425 MTERF2Q49AM1 385 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 PLEKHG4Q58EX7 1191 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 IER5Q5VY09 327 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 Q7L0L9 218 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 NME8Q8N427 588 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 SEPT8Q92599 483 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 DYDC2Q96IM9 177 aa19.11■□□□□ 0.65
VPS52-215ENST00000464425 WRAP73Q9P2S5 460 aaPredicted RBP19.11■□□□□ 0.65
VPS52-215ENST00000464425 M0QZ92 97 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 MAGEB2O15479 319 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 BAIAP3O94812 1187 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 RPLP2P05387 115 aaKnown RBP19.1■□□□□ 0.65
VPS52-215ENST00000464425 ATP2A2P16615 1042 aaKnown RBP19.1■□□□□ 0.65
VPS52-215ENST00000464425 TECP42680 631 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 RABGGTBP53611 331 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 EFCAB12Q6NXP0 572 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 TPH2Q8IWU9 490 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 LRRC71Q8N4P6 559 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 PPP1R16BQ96T49 567 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 EIF2AK1Q9BQI3 630 aaKnown RBP19.1■□□□□ 0.65
VPS52-215ENST00000464425 LXNQ9BS40 222 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 NIFKQ9BYG3 293 aaKnown RBP19.1■□□□□ 0.65
VPS52-215ENST00000464425 PBX4Q9BYU1 374 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 SUGCTQ9HAC7 445 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 GINS2Q9Y248 185 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 PCDHB6Q9Y5E3 794 aa19.1■□□□□ 0.65
VPS52-215ENST00000464425 ABHD14A-ACY1A0A1B0GW23 586 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 POTEMA6NI47 508 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 OR52Z1P0C646 297 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 KCNJ6P48051 423 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 CLCN3P51790 818 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 WDR5P61964 334 aaKnown RBP19.09■□□□□ 0.65
VPS52-215ENST00000464425 TBC1D8BQ0IIM8 1120 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 ORC2Q13416 577 aaPredicted RBP19.09■□□□□ 0.65
VPS52-215ENST00000464425 LPIN1Q14693 890 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 TARBP2Q15633 366 aaKnown RBP19.09■□□□□ 0.65
VPS52-215ENST00000464425 FBXO47Q5MNV8 452 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 PLA2G4FQ68DD2 849 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 GPR153Q6NV75 609 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 ANO5Q75V66 913 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 TMCO2Q7Z6W1 182 aaPredicted RBP19.09■□□□□ 0.65
VPS52-215ENST00000464425 DEFB123Q8N688 67 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 FAM161BQ96MY7 647 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 IFIH1Q9BYX4 1025 aaKnown RBP19.09■□□□□ 0.65
VPS52-215ENST00000464425 CELF4Q9BZC1 486 aaKnown RBP19.09■□□□□ 0.65
VPS52-215ENST00000464425 DAXXQ9UER7 740 aaPredicted RBP19.09■□□□□ 0.65
VPS52-215ENST00000464425 MTMR6Q9Y217 621 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 TRPV2Q9Y5S1 764 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 WDR81Q562E7 1941 aa19.09■□□□□ 0.65
VPS52-215ENST00000464425 VPS37CA5D8V6 355 aaPredicted RBP19.08■□□□□ 0.64
VPS52-215ENST00000464425 DKC1O60832 514 aaKnown RBP eCLIP19.08■□□□□ 0.64
VPS52-215ENST00000464425 SLITRK3O94933 977 aa19.08■□□□□ 0.64
VPS52-215ENST00000464425 VTNP04004 478 aa19.08■□□□□ 0.64
VPS52-215ENST00000464425 DNAJB2P25686 324 aa19.08■□□□□ 0.64
VPS52-215ENST00000464425 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.08■□□□□ 0.64
VPS52-215ENST00000464425 BRAPQ7Z569 592 aa19.08■□□□□ 0.64
VPS52-215ENST00000464425 C4orf32Q8N8J7 132 aa19.08■□□□□ 0.64
VPS52-215ENST00000464425 ZSWIM4Q9H7M6 989 aa19.08■□□□□ 0.64
VPS52-215ENST00000464425 CDHR5Q9HBB8 845 aa19.08■□□□□ 0.64
VPS52-215ENST00000464425 EVPLQ92817 2033 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 ZBTB39O15060 712 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 MYOGP15173 224 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 TMOD1P28289 359 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 YWHABP31946 246 aaKnown RBP19.07■□□□□ 0.64
VPS52-215ENST00000464425 NPEPPSP55786 919 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 DEFB103AP81534 67 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 PTGDRQ13258 359 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 KIZQ2M2Z5 673 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 ZNF697Q5TEC3 545 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 C4orf19Q8IY42 314 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 ZNF579Q8NAF0 562 aaKnown RBP19.07■□□□□ 0.64
VPS52-215ENST00000464425 PHOSPHO2Q8TCD6 241 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 TIFAQ96CG3 184 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 CEP89Q96ST8 783 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 SLC9A7Q96T83 725 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 HSD17B14Q9BPX1 270 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 ZSCAN16Q9H4T2 348 aaPredicted RBP19.07■□□□□ 0.64
VPS52-215ENST00000464425 AGO3Q9H9G7 860 aaKnown RBP19.07■□□□□ 0.64
VPS52-215ENST00000464425 MSRAQ9UJ68 235 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 AKT3Q9Y243 479 aa19.07■□□□□ 0.64
VPS52-215ENST00000464425 YBX2Q9Y2T7 364 aaKnown RBP19.07■□□□□ 0.64
VPS52-215ENST00000464425 A0A087WWV3 80 aa19.06■□□□□ 0.64
VPS52-215ENST00000464425 EFCAB14O75071 495 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms