RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SLC12A7Q9Y666 1083 aa4.71□□□□□ -1.66
SCFD1-204ENST00000463622 ZC3H12DA2A288 527 aaKnown RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 TRAF5O00463 557 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 ABLIM1O14639 778 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 AURKAO14965 403 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 PPP1R11O60927 126 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 PPM1BO75688 479 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 TBC1D8O95759 1140 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 DBHP09172 617 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 U2AF1L5P0DN76 240 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 IARSP41252 1262 aaKnown RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 EPS15P42566 896 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 U2AF1Q01081 240 aaKnown RBP eCLIP4.7□□□□□ -1.668e-6■■□□□ 11.7
SCFD1-204ENST00000463622 VHLLQ6RSH7 139 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 OLFM4Q6UX06 510 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 CLEC4GQ6UXB4 293 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 CYP2R1Q6VVX0 501 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 C19orf47Q8N9M1 422 aaKnown RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 ZNF428Q96B54 188 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 C20orf173Q96LM9 149 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 PSMD1Q99460 953 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 TGIF2Q9GZN2 237 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 GBP3Q9H0R5 595 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 ZCCHC4Q9H5U6 513 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 RRP7AQ9Y3A4 280 aaKnown RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 RWDD3Q9Y3V2 267 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 PCDHA5Q9Y5H7 936 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 F8W031 263 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 RFXAPO00287 272 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 IRS4O14654 1257 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 BUB1BO60566 1050 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 TRIM13O60858 407 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 HOXA5P20719 270 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 PRKAR2BP31323 418 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 L1CAMP32004 1257 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 LIMS1P48059 325 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 AFF3P51826 1226 aaKnown RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 ST5P78524 1137 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 CBX2Q14781 532 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 OLFML2BQ68BL8 750 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 CNKSR3Q6P9H4 555 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 ZC3H14Q6PJT7 736 aaKnown RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 FAM129CQ86XR2 697 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 OR6P1Q8NGX9 317 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 DACT3Q96B18 629 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 ZNF496Q96IT1 587 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-204ENST00000463622 CCSER2Q9H7U1 834 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 PDLIM7Q9NR12 457 aa4.7□□□□□ -1.66
SCFD1-204ENST00000463622 PDE4DIPQ5VU43 2346 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 VIRMAQ69YN4 1812 aaKnown RBP4.69□□□□□ -1.66
SCFD1-204ENST00000463622 ADAMTSL1Q8N6G6 1762 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 C2orf71A6NGG8 1288 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 APAF1O14727 1248 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 A1BGP04217 495 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 ALDH1B1P30837 517 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 SEPHS1P49903 392 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 AMPD2Q01433 879 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 MTHFSDQ2M296 383 aaKnown RBP4.69□□□□□ -1.66
SCFD1-204ENST00000463622 ARHGEF39Q8N4T4 335 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 JDP2Q8WYK2 163 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 PPP1R14AQ96A00 147 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 SEC16BQ96JE7 1060 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 CFAP53Q96M91 514 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 GPRC5CQ9NQ84 441 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 GULP1Q9UBP9 304 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 AKT3Q9Y243 479 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 SNED1Q8TER0 1413 aa4.69□□□□□ -1.66
SCFD1-204ENST00000463622 KCNH1O95259 989 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 CELF2O95319 508 aaKnown RBP4.68□□□□□ -1.66
SCFD1-204ENST00000463622 MAPKAPK2P49137 400 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 CASP7P55210 303 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 PRR5P85299 388 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 TMEM62Q0P6H9 643 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 NOGQ13253 232 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 WDR43Q15061 677 aaKnown RBP eCLIP4.68□□□□□ -1.66
SCFD1-204ENST00000463622 CRY2Q49AN0 593 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 EEF1DP3Q658K8 133 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 RCSD1Q6JBY9 416 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 ZNF790Q6PG37 636 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 NBPF5PQ86XG9 351 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-204ENST00000463622 ZNF513Q8N8E2 541 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-204ENST00000463622 IL17REQ8NFR9 667 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 PWWP2AQ96N64 755 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 THUMPD2Q9BTF0 503 aaKnown RBP4.68□□□□□ -1.66
SCFD1-204ENST00000463622 PARD6AQ9NPB6 346 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 DBR1Q9UK59 544 aaKnown RBP4.68□□□□□ -1.66
SCFD1-204ENST00000463622 BACE2Q9Y5Z0 518 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 HEG1Q9ULI3 1381 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 SCN4AP35499 1836 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 CYBBP04839 570 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 ATF4P18848 351 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-204ENST00000463622 SOX10P56693 466 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 GRM1Q13255 1194 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 DCTN1Q14203 1278 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 NR1I3Q14994 352 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 PAQR3Q6TCH7 311 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 ZDHHC14Q8IZN3 488 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 SYT8Q8NBV8 401 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 VPS33BQ9H267 617 aa4.68□□□□□ -1.66
SCFD1-204ENST00000463622 ADARB2Q9NS39 739 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms