RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 NACC1Q96RE7 527 aa22.13■■□□□ 1.13
COL9A3-204ENST00000463487 USP28Q96RU2 1077 aa22.13■■□□□ 1.13
COL9A3-204ENST00000463487 ANKEF1Q9NU02 776 aa22.13■■□□□ 1.13
COL9A3-204ENST00000463487 TRIP12Q14669 1992 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-204ENST00000463487 MYH15Q9Y2K3 1946 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 SLC26A4O43511 780 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 YEATS4O95619 227 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 MAGEA10P43363 369 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-204ENST00000463487 NASPP49321 788 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-204ENST00000463487 DNM2P50570 870 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 CCL23P55773 120 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 MDM2Q00987 491 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-204ENST00000463487 SLC39A14Q15043 492 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 ANO5Q75V66 913 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 RPUSD2Q8IZ73 545 aaKnown RBP22.12■■□□□ 1.13
COL9A3-204ENST00000463487 ZNF710Q8N1W2 664 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 NME8Q8N427 588 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 KCTD17Q8N5Z5 321 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 METTL13Q8N6R0 699 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 SLC7A3Q8WY07 619 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 DHX38Q92620 1227 aaKnown RBP22.12■■□□□ 1.13
COL9A3-204ENST00000463487 CDK5RAP3Q96JB5 506 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 MAP7D2Q96T17 732 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 FTOQ9C0B1 505 aaKnown RBP eCLIP22.12■■□□□ 1.133e-9■□□□□ 9.9
COL9A3-204ENST00000463487 CYP26B1Q9NR63 512 aa22.12■■□□□ 1.13
COL9A3-204ENST00000463487 LTBP2Q14767 1821 aa22.11■■□□□ 1.13
COL9A3-204ENST00000463487 ZBTB42B2RXF5 422 aa22.11■■□□□ 1.13
COL9A3-204ENST00000463487 C22orf31O95567 290 aa22.11■■□□□ 1.13
COL9A3-204ENST00000463487 PFKMP08237 780 aa22.11■■□□□ 1.13
COL9A3-204ENST00000463487 RFC5P40937 340 aa22.11■■□□□ 1.13
COL9A3-204ENST00000463487 POLGP54098 1239 aaPredicted RBP22.11■■□□□ 1.13
COL9A3-204ENST00000463487 PTPAQ15257 358 aa22.11■■□□□ 1.13
COL9A3-204ENST00000463487 XKR9Q5GH70 373 aa22.11■■□□□ 1.13
COL9A3-204ENST00000463487 IER5Q5VY09 327 aa22.11■■□□□ 1.13
COL9A3-204ENST00000463487 NT5C3AQ9H0P0 336 aa22.11■■□□□ 1.13
COL9A3-204ENST00000463487 FAM49AQ9H0Q0 323 aaPredicted RBP22.11■■□□□ 1.13
COL9A3-204ENST00000463487 WRAP73Q9P2S5 460 aaPredicted RBP22.11■■□□□ 1.13
COL9A3-204ENST00000463487 RSPH10B2B2RC85 870 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 GAS2O43903 313 aaKnown RBP22.1■■□□□ 1.13
COL9A3-204ENST00000463487 MED24O75448 989 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 IQCF3P0C7M6 154 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 RSPH10BP0C881 870 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 SPATA31C1P0DKV0 1188 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 ITGB8P26012 769 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 TXLNAP40222 546 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 UBA7P41226 1012 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 TARBP2Q15633 366 aaKnown RBP22.1■■□□□ 1.13
COL9A3-204ENST00000463487 IL17AQ16552 155 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 TRIM71Q2Q1W2 868 aaKnown RBP22.1■■□□□ 1.13
COL9A3-204ENST00000463487 PLA2G4FQ68DD2 849 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 RUFY4Q6ZNE9 571 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 KRI1Q8N9T8 703 aaKnown RBP22.1■■□□□ 1.13
COL9A3-204ENST00000463487 RASSF8Q8NHQ8 419 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 KCNG4Q8TDN1 519 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 DNAJB3Q8WWF6 145 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 CALML4Q96GE6 196 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 WNT8AQ9H1J5 351 aa22.1■■□□□ 1.13
COL9A3-204ENST00000463487 TFIP11Q9UBB9 837 aaKnown RBP22.1■■□□□ 1.13
COL9A3-204ENST00000463487 SRPRBQ9Y5M8 271 aaKnown RBP22.1■■□□□ 1.13
COL9A3-204ENST00000463487 UMODL1Q5DID0 1318 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 SPTLC2O15270 562 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 PPP6R2O75170 966 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 STBD1O95210 358 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 CSF2RAP15509 400 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 MARCKSP29966 332 aaPredicted RBP22.09■■□□□ 1.13
COL9A3-204ENST00000463487 KRT85P78386 507 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 FOXD4L6Q3SYB3 417 aaPredicted RBP22.09■■□□□ 1.13
COL9A3-204ENST00000463487 ZNF618Q5T7W0 954 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 EFCAB12Q6NXP0 572 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 POTEGQ6S5H5 508 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 FOXD4L3Q6VB84 417 aaPredicted RBP22.09■■□□□ 1.13
COL9A3-204ENST00000463487 LINC00301Q8NCQ3 95 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 UBE2OQ9C0C9 1292 aaKnown RBP22.09■■□□□ 1.13
COL9A3-204ENST00000463487 DBR1Q9UK59 544 aaKnown RBP22.09■■□□□ 1.13
COL9A3-204ENST00000463487 CIZ1Q9ULV3 898 aaPredicted RBP22.09■■□□□ 1.13
COL9A3-204ENST00000463487 TANC1Q9C0D5 1861 aa22.09■■□□□ 1.13
COL9A3-204ENST00000463487 TNRC18O15417 2968 aaPredicted RBP22.08■■□□□ 1.13
COL9A3-204ENST00000463487 CTSHP09668 335 aa22.08■■□□□ 1.13
COL9A3-204ENST00000463487 NCLP19338 710 aaKnown RBP22.08■■□□□ 1.13
COL9A3-204ENST00000463487 CDC42EP1Q00587 391 aa22.08■■□□□ 1.13
COL9A3-204ENST00000463487 PSRC1Q6PGN9 363 aaPredicted RBP22.08■■□□□ 1.13
COL9A3-204ENST00000463487 WNT8BQ93098 351 aa22.08■■□□□ 1.13
COL9A3-204ENST00000463487 SCLYQ96I15 445 aa22.08■■□□□ 1.13
COL9A3-204ENST00000463487 GDF15Q99988 308 aa22.08■■□□□ 1.13
COL9A3-204ENST00000463487 SUGCTQ9HAC7 445 aa22.08■■□□□ 1.13
COL9A3-204ENST00000463487 KIAA1024Q9UPX6 916 aa22.08■■□□□ 1.13
COL9A3-204ENST00000463487 DNM3Q9UQ16 869 aa22.08■■□□□ 1.13
COL9A3-204ENST00000463487 AKT3Q9Y243 479 aa22.08■■□□□ 1.13
COL9A3-204ENST00000463487 ARHGEF35A5YM69 484 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 TMEM150BA6NC51 233 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 MAFO75444 373 aaPredicted RBP22.07■■□□□ 1.12
COL9A3-204ENST00000463487 DGAT1O75907 488 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 BMP8BP34820 402 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 RARRES1P49788 294 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 NPEPPSP55786 919 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 MRPS6P82932 125 aaKnown RBP22.07■■□□□ 1.12
COL9A3-204ENST00000463487 DNM1Q05193 864 aaKnown RBP22.07■■□□□ 1.12
COL9A3-204ENST00000463487 ZRSR1Q15695 479 aaKnown RBP22.07■■□□□ 1.12
COL9A3-204ENST00000463487 FAM26DQ5JW98 314 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 CABP7Q86V35 215 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms