RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 QARSP47897 775 aaKnown RBP11.19□□□□□ -0.62
MSH5-211ENST00000463144 RARRES1P49788 294 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 VGLL4Q14135 290 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 SH3D19Q5HYK7 790 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 HGSNATQ68CP4 663 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 ZNF662Q6ZS27 426 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 BORCS6Q96GS4 357 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 MAP7D2Q96T17 732 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 SH2D3AQ9BRG2 576 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 NLRC4Q9NPP4 1024 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 ARMCX3Q9UH62 379 aaPredicted RBP11.19□□□□□ -0.62
MSH5-211ENST00000463144 GUCA1BQ9UMX6 200 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 LCTP09848 1927 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 PTPRFP10586 1907 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 WDR81Q562E7 1941 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 TLR2O60603 784 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 PPP1R37O75864 691 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 RGS20O76081 388 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 LYPLA2O95372 231 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 EIF4A3P38919 411 aaKnown RBP11.18□□□□□ -0.62
MSH5-211ENST00000463144 KRT83P78385 493 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 ODR4Q5SWX8 454 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 MAEAQ7L5Y9 396 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 MTERF4Q7Z6M4 381 aaKnown RBP11.18□□□□□ -0.62
MSH5-211ENST00000463144 FAM178BQ8IXR5 827 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 PDCL2Q8N4E4 241 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 GANQ9H2C0 597 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 HAUS4Q9H6D7 363 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 TMOD4Q9NZQ9 345 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 CEP72Q9P209 647 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 MYO1AQ9UBC5 1043 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 DBR1Q9UK59 544 aaKnown RBP11.18□□□□□ -0.62
MSH5-211ENST00000463144 OTOFQ9HC10 1997 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 DOCK5Q9H7D0 1870 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 ADM5C9JUS6 153 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 PEX10O60683 326 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 RPL13P26373 211 aaKnown RBP11.18□□□□□ -0.62
MSH5-211ENST00000463144 POLR2FP61218 127 aaKnown RBP11.18□□□□□ -0.62
MSH5-211ENST00000463144 NFIL3Q16649 462 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 ASTE1Q2TB18 679 aaPredicted RBP11.18□□□□□ -0.62
MSH5-211ENST00000463144 CACNA2D4Q7Z3S7 1137 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 CCDC42Q96M95 316 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 TEX13BQ9BXU2 312 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 A1CFQ9NQ94 594 aaKnown RBP11.18□□□□□ -0.62
MSH5-211ENST00000463144 CYP39A1Q9NYL5 469 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 TELO2Q9Y4R8 837 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 DUSP10Q9Y6W6 482 aa11.18□□□□□ -0.62
MSH5-211ENST00000463144 SLC16A3O15427 465 aaKnown RBP11.17□□□□□ -0.62
MSH5-211ENST00000463144 LCA5LO95447 670 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 AFPP02771 609 aaKnown RBP11.17□□□□□ -0.62
MSH5-211ENST00000463144 ACTN1P12814 892 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 SLC9A1P19634 815 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 CCND2P30279 289 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 YWHABP31946 246 aaKnown RBP11.17□□□□□ -0.62
MSH5-211ENST00000463144 PPP2R3AQ06190 1150 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 CCDC122Q5T0U0 273 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 TREML2Q5T2D2 321 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 XRRA1Q6P2D8 792 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 KIAA1328Q86T90 577 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 C4orf19Q8IY42 314 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 MNS1Q8NEH6 495 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 SLC35C1Q96A29 364 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 JAKMIP2Q96AA8 810 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 INPP4AQ96PE3 977 aaPredicted RBP11.17□□□□□ -0.62
MSH5-211ENST00000463144 ADARB2Q9NS39 739 aaKnown RBP11.17□□□□□ -0.62
MSH5-211ENST00000463144 DMAC2Q9NW81 257 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 HOXC10Q9NYD6 342 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 PCDHB13Q9Y5F0 798 aa11.17□□□□□ -0.62
MSH5-211ENST00000463144 CTAGE9A4FU28 777 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 TFRCP02786 760 aaKnown RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 KIF11P52732 1056 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 NSUN6Q8TEA1 469 aaKnown RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 GPRASP2Q96D09 838 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 RNF181Q9P0P0 153 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 UBE4BO95155 1302 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 MYPNQ86TC9 1320 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 EFCAB8A8MWE9 144 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 WDR64B1ANS9 1081 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 BACH1O14867 736 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 EPB41P11171 864 aaKnown RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 XRCC5P13010 732 aaKnown RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 KCNA2P16389 499 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 PON1P27169 355 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 VAV2P52735 878 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 NPEPPSP55786 919 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 PSMC5P62195 406 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 AMPD2Q01433 879 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 MAPK8IP2Q13387 824 aaPredicted RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 PLS1Q14651 629 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 UTP14CQ5TAP6 766 aaKnown RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 PLA2G4FQ68DD2 849 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 FBXO38Q6PIJ6 1188 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 TRMT1LQ7Z2T5 733 aaKnown RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 SYN2Q92777 582 aaPredicted RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 NAPGQ99747 312 aaPredicted RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 ACAD9Q9H845 621 aa11.16□□□□□ -0.62
MSH5-211ENST00000463144 METTL14Q9HCE5 456 aaKnown RBP11.16□□□□□ -0.62
MSH5-211ENST00000463144 AGPAT3Q9NRZ7 376 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms