RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 AGO3Q9H9G7 860 aaKnown RBP8.24□□□□□ -1.09
PTPRF-210ENST00000463041 DISC1Q9NRI5 854 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 RNF216Q9NWF9 866 aaPredicted RBP8.24□□□□□ -1.09
PTPRF-210ENST00000463041 GABBR1Q9UBS5 961 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 PADI3Q9ULW8 664 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 CEP131Q9UPN4 1083 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 SAMM50Q9Y512 469 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 IGSF9BQ9UPX0 1349 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 NLRC5Q86WI3 1866 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 ZBTB42B2RXF5 422 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 H3BNC9 293 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 GAS7O60861 476 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 CENPBP07199 599 aaPredicted RBP8.23□□□□□ -1.09
PTPRF-210ENST00000463041 STAG3L1P0CL83 205 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 BMP1P13497 986 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 TMOD1P28289 359 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 CD52P31358 61 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 JAK3P52333 1124 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 CRYBB1P53674 252 aaPredicted RBP8.23□□□□□ -1.09
PTPRF-210ENST00000463041 SCRN1Q12765 414 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 NONOQ15233 471 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTPRF-210ENST00000463041 PTPROQ16827 1216 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 LRCH2Q5VUJ6 765 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 KRT40Q6A162 431 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 KRT25Q7Z3Z0 450 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 TMEM192Q8IY95 271 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 WASF1Q92558 559 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 SLC5A5Q92911 643 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 HLA-CQ95604 372 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 ZNF689Q96CS4 500 aaPredicted RBP8.23□□□□□ -1.09
PTPRF-210ENST00000463041 ZBTB10Q96DT7 871 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 MBOAT7Q96N66 472 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 C17orf80Q9BSJ5 609 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 TEKT3Q9BXF9 490 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 MTUS1Q9ULD2 1270 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 RWDD3Q9Y3V2 267 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 MUC3AQ02505 3323 aa8.23□□□□□ -1.09
PTPRF-210ENST00000463041 RALGAPA2Q2PPJ7 1873 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 C5orf67F2Z3F1 127 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 GPR182O15218 404 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 RPS6KA5O75582 802 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 PSMD10O75832 226 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 DGKIO75912 1065 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 BMPR1AP36894 532 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 CDC42EP1Q00587 391 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 TMEM62Q0P6H9 643 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 NFX1Q12986 1120 aaKnown RBP8.22□□□□□ -1.09
PTPRF-210ENST00000463041 PAK2Q13177 524 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 GPM6BQ13491 265 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 NPY5RQ15761 445 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 EFCAB12Q6NXP0 572 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 NPAS4Q8IUM7 802 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 CRIPAKQ8N1N5 446 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 METTL13Q8N6R0 699 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 GDPD5Q8WTR4 605 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 CLP1Q92989 425 aaKnown RBP8.22□□□□□ -1.09
PTPRF-210ENST00000463041 MRPL38Q96DV4 380 aaKnown RBP8.22□□□□□ -1.09
PTPRF-210ENST00000463041 FAM20AQ96MK3 541 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 NAP1L4Q99733 375 aaKnown RBP8.22□□□□□ -1.09
PTPRF-210ENST00000463041 PHF20Q9BVI0 1012 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 CDHR5Q9HBB8 845 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 ERVK-5Q9HDB9 667 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 TPCN1Q9ULQ1 816 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 STK36Q9NRP7 1315 aa8.22□□□□□ -1.09
PTPRF-210ENST00000463041 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 CCDC194A0A1B0GVG4 234 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 TNFRSF10AO00220 468 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 NCK2O43639 380 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 ZNF862O60290 1169 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 GPR32O75388 356 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 C22orf31O95567 290 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 GCFC2P16383 781 aaKnown RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 SARSP49591 514 aaKnown RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 AK2P54819 239 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 FAM189BP81408 668 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 BTG3Q14201 252 aaPredicted RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 NAALADL2Q58DX5 795 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 PPP4R3AQ6IN85 833 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 B3GNT9Q6UX72 402 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 SLC24A5Q71RS6 500 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 TRMT1LQ7Z2T5 733 aaKnown RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 MIER3Q7Z3K6 550 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 CMTR2Q8IYT2 770 aaKnown RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 AIFM3Q96NN9 605 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 PLVAPQ9BX97 442 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 NIFKQ9BYG3 293 aaKnown RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 LMAN2LQ9H0V9 348 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 TMX1Q9H3N1 280 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 UNC45AQ9H3U1 944 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 RC3H2Q9HBD1 1191 aaKnown RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 RGS18Q9NS28 235 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 C1orf112Q9NSG2 853 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 ORC3Q9UBD5 711 aaPredicted RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 DDX25Q9UHL0 483 aaKnown RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 LRFN2Q9ULH4 789 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 ST3GAL5Q9UNP4 418 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 KCNJ14Q9UNX9 436 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 GINS2Q9Y248 185 aa8.21□□□□□ -1.1
PTPRF-210ENST00000463041 NOC2LQ9Y3T9 749 aaKnown RBP8.21□□□□□ -1.1
PTPRF-210ENST00000463041 PCDHB7Q9Y5E2 793 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms