RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 AVPR2P30518 371 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 STAT5BP51692 787 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 VCPP55072 806 aaKnown RBP12.41□□□□□ -0.42
CBX3-205ENST00000462165 ERVFC1P60507 584 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 RBM10P98175 930 aaKnown RBP12.41□□□□□ -0.42
CBX3-205ENST00000462165 NFX1Q12986 1120 aaKnown RBP12.41□□□□□ -0.42
CBX3-205ENST00000462165 KCNC3Q14003 757 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 PTPN21Q16825 1174 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 TMEM266Q2M3C6 531 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 SPOUT1Q5T280 376 aaKnown RBP12.41□□□□□ -0.42
CBX3-205ENST00000462165 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 MTHFD1LQ6UB35 978 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 RASGRP4Q8TDF6 673 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 MXRA8Q9BRK3 442 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 ERVK-5Q9HDB9 667 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 RGS18Q9NS28 235 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 C1orf112Q9NSG2 853 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 MYH9P35579 1960 aaKnown RBP12.4□□□□□ -0.42
CBX3-205ENST00000462165 TBKBP1A7MCY6 615 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 C9IYK1 514 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 GFRA3O60609 400 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 RPS6KA5O75582 802 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 ATG7O95352 703 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 CHMLP26374 656 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 SLC26A2P50443 739 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 ACTR2P61160 394 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 ODR4Q5SWX8 454 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 FAM102BQ5T8I3 360 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 CASC1Q6TDU7 716 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 SLC24A5Q71RS6 500 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 CMTR1Q8N1G2 835 aaKnown RBP12.4□□□□□ -0.42
CBX3-205ENST00000462165 TMTC2Q8N394 836 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 COLGALT1Q8NBJ5 622 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 MAP4K1Q92918 833 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 SDF4Q9BRK5 362 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 S1PR5Q9H228 398 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 CWH43Q9H720 699 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 LZTS1Q9Y250 596 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 NOC2LQ9Y3T9 749 aaKnown RBP12.4□□□□□ -0.42
CBX3-205ENST00000462165 MYO10Q9HD67 2058 aa12.4□□□□□ -0.42
CBX3-205ENST00000462165 CACNA1HO95180 2353 aa12.4□□□□□ -0.43
CBX3-205ENST00000462165 WDR81Q562E7 1941 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 IGKV6D-21A0A0A0MT36 114 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 DENND3A2RUS2 1198 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 SGSM2O43147 1006 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 HBP1O60381 514 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 SRGAP2BP0DMP2 458 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 CALM1P0DP23 149 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 CALM2P0DP24 149 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 CALM3P0DP25 149 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 KLRC1P26715 233 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 NUBP1P53384 320 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 PLCB3Q01970 1234 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 ANKRD54Q6NXT1 300 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 THNSL1Q8IYQ7 743 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 CYP2W1Q8TAV3 490 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 TMEM87BQ96K49 555 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 ADAM2Q99965 735 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 CDHR5Q9HBB8 845 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 TYW1Q9NV66 732 aaKnown RBP12.39□□□□□ -0.43
CBX3-205ENST00000462165 FAM86C1Q9NVL1 165 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 TMEM260Q9NX78 707 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 HCSTQ9UBK5 93 aa12.39□□□□□ -0.43
CBX3-205ENST00000462165 DCHS1Q96JQ0 3298 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 CCDC69A6NI79 296 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 SH2B2O14492 632 aaPredicted RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 GPR182O15218 404 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 PRC1O43663 620 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 ARP10275 920 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 HOXB8P17481 243 aaPredicted RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 LAG3P18627 525 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 RXRAP19793 462 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 IBSPP21815 317 aaPredicted RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 PDE4AP27815 886 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 TECP42680 631 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 LIFRP42702 1097 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 FAM189BP81408 668 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 ITGB3BPQ13352 177 aaPredicted RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 SYCE2Q6PIF2 218 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 NFXL1Q6ZNB6 911 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 TEX2Q8IWB9 1127 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 KIAA0319LQ8IZA0 1049 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 TMEM40Q8WWA1 233 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 MRPS27Q92552 414 aaKnown RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 ATOH1Q92858 354 aaPredicted RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 RIPOR3Q96MK2 946 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 ELAC1Q9H777 363 aaKnown RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 AGO4Q9HCK5 861 aaKnown RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 TMEM161AQ9NX61 479 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 ST3GAL5Q9UNP4 418 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 GINS2Q9Y248 185 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 COL1A2P08123 1366 aa12.38□□□□□ -0.43
CBX3-205ENST00000462165 ZFHX2Q9C0A1 2572 aaPredicted RBP12.38□□□□□ -0.43
CBX3-205ENST00000462165 hCG_1642624A0A1W2PR95 340 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 PROB1E7EW31 1015 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 MCM5P33992 734 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 CEP55Q53EZ4 464 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 PLPP4Q5VZY2 271 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 ABHD15Q6UXT9 468 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms