RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 RFC2P35250 354 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 LONP1P36776 959 aaKnown RBP13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 CCT6AP40227 531 aaKnown RBP13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 MAGEA10P43363 369 aaPredicted RBP13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 FPGSQ05932 587 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 TBC1D8BQ0IIM8 1120 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 SLC39A14Q15043 492 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 TARBP2Q15633 366 aaKnown RBP13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 TRIM71Q2Q1W2 868 aaKnown RBP13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 KCTD17Q8N5Z5 321 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 SNX29Q8TEQ0 813 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 TRAPPC12Q8WVT3 735 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 BADQ92934 168 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 JPH2Q9BR39 696 aaPredicted RBP13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 WNT8AQ9H1J5 351 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 CYP26B1Q9NR63 512 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 ANKEF1Q9NU02 776 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 CFAP45Q9UL16 551 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 UMODL1Q5DID0 1318 aa13.04□□□□□ -0.32
TRAF3IP1-204ENST00000462122 MYH9P35579 1960 aaKnown RBP13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 RANBP2P49792 3224 aaKnown RBP13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 SLC26A4O43511 780 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 MED24O75448 989 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 YEATS4O95619 227 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 IQCF3P0C7M6 154 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 TMOD1P28289 359 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 DDIT3P35638 169 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 THPOP40225 353 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 PPIGQ13427 754 aaKnown RBP eCLIP13.03□□□□□ -0.325e-6■■■□□ 18.4
TRAF3IP1-204ENST00000462122 STK38Q15208 465 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 POTEHQ6S545 545 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 RUFY4Q6ZNE9 571 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 LRRC8DQ7L1W4 858 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 NME8Q8N427 588 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 LINC00301Q8NCQ3 95 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 WNT8BQ93098 351 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 CEP170P1Q96L14 293 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 CCDC43Q96MW1 224 aaKnown RBP13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 NACC1Q96RE7 527 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 GDF15Q99988 308 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 ZDHHC9Q9Y397 364 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 SRPRBQ9Y5M8 271 aaKnown RBP13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 LTBP2Q14767 1821 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 KDM3AQ9Y4C1 1321 aa13.03□□□□□ -0.32
TRAF3IP1-204ENST00000462122 TMEM150BA6NC51 233 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 RSPH10B2B2RC85 870 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MAFO75444 373 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PFKMP08237 780 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 RSPH10BP0C881 870 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CSF2RAP15509 400 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MARCKSP29966 332 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 BMP8BP34820 402 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 RFC5P40937 340 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CCL23P55773 120 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 XKR9Q5GH70 373 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 HYIQ5T013 277 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ZNF618Q5T7W0 954 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PLA2G4FQ68DD2 849 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 POTEGQ6S5H5 508 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 METTL13Q8N6R0 699 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 KCNG4Q8TDN1 519 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 DNAJB3Q8WWF6 145 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SLC7A3Q8WY07 619 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CEP89Q96ST8 783 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 MAP7D2Q96T17 732 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 NT5C3AQ9H0P0 336 aa13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 FAM49AQ9H0Q0 323 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 FBXO2Q9UK22 296 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP1-204ENST00000462122 IGKV6-21A0A0C4DH24 114 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PP2D1A8MPX8 630 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 M0QZ92 97 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SPTLC2O15270 562 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 GAS2O43903 313 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PPP6R2O75170 966 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 DGAT1O75907 488 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 UBA7P41226 1012 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 RARRES1P49788 294 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 DNM2P50570 870 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 POLGP54098 1239 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 NPEPPSP55786 919 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 KRT85P78386 507 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 DNM1Q05193 864 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 FOXD4L6Q3SYB3 417 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 FAM26DQ5JW98 314 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 IER5Q5VY09 327 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 EFCAB12Q6NXP0 572 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PSRC1Q6PGN9 363 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 TRAF7Q6Q0C0 670 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 FOXD4L3Q6VB84 417 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 RPUSD2Q8IZ73 545 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 LINC01465Q8N7H1 131 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 PIGOQ8TEQ8 1089 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 ZBTB10Q96DT7 871 aa13.01□□□□□ -0.33
TRAF3IP1-204ENST00000462122 SCLYQ96I15 445 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms