RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 TMEM53Q6P2H8 277 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 USP49Q70CQ1 688 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 SPATA24Q86W54 205 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 ZSCAN29Q8IWY8 852 aaPredicted RBP9.97□□□□□ -0.81
LINC01140-201ENST00000461990 USHBP1Q8N6Y0 703 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
LINC01140-201ENST00000461990 GRAMD1AQ96CP6 724 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 HAUS1Q96CS2 278 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 KAZALD1Q96I82 304 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 SELENOSQ9BQE4 189 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 METTL14Q9HCE5 456 aaKnown RBP9.97□□□□□ -0.81
LINC01140-201ENST00000461990 CNOT7Q9UIV1 285 aaKnown RBP9.97□□□□□ -0.81
LINC01140-201ENST00000461990 R3HDM2Q9Y2K5 976 aaKnown RBP9.97□□□□□ -0.81
LINC01140-201ENST00000461990 MAP3K19Q56UN5 1328 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 NID2Q14112 1375 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 CCDC162PA2VCL2 907 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 CCDC188H7C350 402 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 KRT38O76015 456 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 ASMTLO95671 621 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 MGAT5Q09328 741 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 IDI1Q13907 227 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 DDB1Q16531 1140 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 STAG2Q8N3U4 1231 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 DEPTORQ8TB45 409 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 NRG4Q8WWG1 115 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 ASCC2Q9H1I8 757 aaPredicted RBP9.97□□□□□ -0.81
LINC01140-201ENST00000461990 SLITRK6Q9H5Y7 841 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 VPS54Q9P1Q0 977 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 HESX1Q9UBX0 185 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 ABCF2Q9UG63 623 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 CD2APQ9Y5K6 639 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 PASKQ96RG2 1323 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 TNRQ92752 1358 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 KANSL1LA0AUZ9 987 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 P4HA2O15460 535 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 MMP1P03956 469 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 RGS2P41220 211 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 AFMP43652 599 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 MTTPP55157 894 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 ADARP55265 1226 aaKnown RBP9.96□□□□□ -0.81
LINC01140-201ENST00000461990 CFAP157Q5JU67 520 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 ZC3H18Q86VM9 953 aaKnown RBP9.96□□□□□ -0.81
LINC01140-201ENST00000461990 NLRP3Q96P20 1036 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 PYM1Q9BRP8 204 aaKnown RBP9.96□□□□□ -0.81
LINC01140-201ENST00000461990 DENND2DQ9H6A0 471 aaPredicted RBP9.96□□□□□ -0.81
LINC01140-201ENST00000461990 FAIMQ9NVQ4 179 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 LNPEPQ9UIQ6 1025 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 GGT7Q9UJ14 662 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 XDHP47989 1333 aa9.96□□□□□ -0.81
LINC01140-201ENST00000461990 HOXA10P31260 410 aaPredicted RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 EMP3P54852 163 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 PDE1BQ01064 536 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 PPARDQ03181 441 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 R3HDM1Q15032 1099 aaKnown RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 THOC7Q6I9Y2 204 aaKnown RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 LRRC74BQ6ZQY2 392 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 DQX1Q8TE96 717 aaKnown RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 ZNF184Q99676 751 aaPredicted RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 HNRNPABQ99729 332 aaKnown RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 UBAC1Q9BSL1 405 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 NRDE2Q9H7Z3 1164 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 FGFR1OP2Q9NVK5 253 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 NR2E3Q9Y5X4 410 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 SSU72P8A0A1W2PR75 194 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 POTEFA5A3E0 1075 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 HNRNPCL1O60812 293 aaKnown RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 POTEIP0CG38 1075 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 MAGEA1P43355 309 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 CEBPAP49715 358 aaPredicted RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 RASSF2P50749 326 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 SLC34A1Q06495 639 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 MFSD5Q6N075 450 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 POTEEQ6S8J3 1075 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 ARHGAP27Q6ZUM4 889 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 TAOK1Q7L7X3 1001 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 ADSSL1Q8N142 457 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 TTC8Q8TAM2 541 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 SLC7A6OSQ96CW6 309 aaPredicted RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 TBC1D10AQ9BXI6 508 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 PABPC3Q9H361 631 aaKnown RBP9.96□□□□□ -0.82
LINC01140-201ENST00000461990 KLHL14Q9P2G3 628 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 ZNF212Q9UDV6 495 aa9.96□□□□□ -0.82
LINC01140-201ENST00000461990 LAMB4A4D0S4 1761 aa9.95□□□□□ -0.82
LINC01140-201ENST00000461990 RANBP6O60518 1105 aaKnown RBP9.95□□□□□ -0.82
LINC01140-201ENST00000461990 PLEKP08567 350 aaPredicted RBP9.95□□□□□ -0.82
LINC01140-201ENST00000461990 YARSP54577 528 aaKnown RBP9.95□□□□□ -0.82
LINC01140-201ENST00000461990 NAB2Q15742 525 aa9.95□□□□□ -0.82
LINC01140-201ENST00000461990 WDR72Q3MJ13 1102 aa9.95□□□□□ -0.82
LINC01140-201ENST00000461990 TNNI3KQ59H18 835 aa9.95□□□□□ -0.82
LINC01140-201ENST00000461990 ECHDC2Q86YB7 292 aa9.95□□□□□ -0.82
LINC01140-201ENST00000461990 CGREF1Q99674 301 aa9.95□□□□□ -0.82
LINC01140-201ENST00000461990 C9orf78Q9NZ63 289 aaPredicted RBP9.95□□□□□ -0.82
LINC01140-201ENST00000461990 FPGT-TNNI3KV9GXZ4 949 aa9.95□□□□□ -0.82
LINC01140-201ENST00000461990 MYH4Q9Y623 1939 aa9.95□□□□□ -0.82
LINC01140-201ENST00000461990 RGS16O15492 202 aaPredicted RBP9.95□□□□□ -0.82
LINC01140-201ENST00000461990 PDGFRBP09619 1106 aa9.95□□□□□ -0.82
LINC01140-201ENST00000461990 EIF4A3P38919 411 aaKnown RBP9.95□□□□□ -0.82
LINC01140-201ENST00000461990 TXKP42681 527 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms